KEGG   Geobacter sulfurreducens KN400: KN400_2101Help
Entry
KN400_2101        CDS       T01940                                 

Gene name
mrdA
Definition
(GenBank) peptidoglycan transpeptidase
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
gsk  Geobacter sulfurreducens KN400
Pathway
gsk00550  Peptidoglycan biosynthesis
gsk01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:gsk00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    KN400_2101 (mrdA)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    KN400_2101 (mrdA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:gsk01011]
    KN400_2101 (mrdA)
Enzymes [BR:gsk01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     KN400_2101 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:gsk01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   KN400_2101 (mrdA)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Transpeptidase PBP_dimer
Motif
Other DBs
NCBI-ProteinID: ADI84913
LinkDB All DBs
Position
complement(2255292..2257211)
Genome map
AA seq 639 aa AA seqDB search
MNGQRFIRDTQEPKRQLVVLLIAVGVFFFILVTRLWYLQIIKAEDFQSLSENNRLRLVPV
AASRGTIFDRNGAVLVSNRPSFSVAVIPQEVRDRDWLVDQLVTLLGADRDELVKKWEKGK
GRARYYPIVLASGITRDQLELLEEKRLWLPGIEVEMKPVRQYENGTLAAHLLGYIGEISD
EELKNPAFVGYNSGDYLGKSGIERSWEEVLHGHDGGRQIEVDARGRILRTIAETPPTMGS
SLVLTIDAQLQKRAEQAFGDQAGAAVVMEVNTGEILAFVSNPEFDPALFAGRMPPEIWKQ
YLEDKRHPLENKALKGQYPPGSTYKIITALAGLEEGIIDDHTTVTCKGSYALGNTTFRCW
DKKGHGAVDLRRALRESCDVYFYVLGEKLGIDRLSAYAQKFALGAPMGVGLDNEKGGLIP
TSAWKLQRHKTRWFQGDTLSAAIGQGYVLMTPIQLASMTAAIATDGIVYRPRLVKRIIDR
DGKVLREFQPEIITRADISPRSFKSVKEGLWAVVNESGGTGGMSRIPDVRVAGKTGTSQV
VKLRDTRGFIPYQYRDHALFVAYAPYEHPEVAVAVVIEHGEHGGSAAAPIAGSILRAYFE
GKGVIRRPVKAGKGTAAGDDGSGENATSDEGAQPREDQE
NT seq 1920 nt NT seq  +upstreamnt  +downstreamnt
atgaacggtcagcgcttcatacgcgatacgcaggagccgaagcgacagctggtcgtgctg
cttatcgcggtgggggtgtttttcttcatcctcgtcacgcggctctggtacctccagatt
atcaaggctgaggattttcagagcctttccgaaaacaaccggctgcgcctcgtgcccgtc
gcggcgtcccgcgggaccatattcgaccgtaacggagcggtcctggtgagcaaccggcct
tccttcagcgttgccgtcattccccaggaagtccgcgatcgcgattggctggtcgatcaa
ctggttaccctccttggtgccgacagggatgaactcgtcaaaaagtgggagaaagggaag
ggacgtgcccgctactatcccatcgttctcgcatcggggatcacccgtgaccaactggag
cttctggaagagaaacggctctggctccccggcatcgaggtcgagatgaagccggtacgt
cagtatgagaacggtacactggcggctcacctgctgggctacatcggtgaaatctcggac
gaagagctgaaaaacccggcctttgtcggctacaattcaggcgattacctgggcaagagc
gggattgagcgcagctgggaagaggtgctccacggccacgacggtggacggcagatcgag
gtagacgcccgggggcggatcctcaggacaattgccgagacgccccccaccatggggtcg
agcctggtcctgaccatcgacgcgcaacttcagaagcgggcggagcaggcttttggcgac
caggcgggagctgcggtggtcatggaagtgaacaccggcgaaattctggcattcgtcagc
aatcccgaattcgatccggctctgttcgccggcaggatgccccccgaaatctggaaacaa
tacctggaagacaagcgccatcccctggagaacaaggccttgaaggggcagtatccgccg
ggatcgacctacaagatcatcaccgctctggcagggcttgaagaggggatcatcgacgac
cacactacggtaacctgcaagggttcttatgcgctagggaataccacgtttcgctgctgg
gacaagaaggggcacggagcggtcgatctgaggcgagcccttcgcgagtcgtgcgacgtc
tacttctatgtgctcggcgagaagctcggcattgaccggctttccgcctatgcccaaaag
tttgccctcggtgcgcccatgggggtcggcctggacaatgaaaagggtgggctcatcccc
acctccgcctggaagcttcagcggcacaaaaccaggtggttccagggagatacgctgagt
gcggccatcggccagggctacgtcctcatgacccccatccagctggcatcaatgaccgct
gccattgccacggacggtatcgtgtaccggccccggctggtaaagcggatcattgaccgc
gacggcaaggtcctcagggagtttcagccggagatcatcacccgggccgatatttcgccg
cgcagtttcaagtcggtcaaggaaggactgtgggctgtcgtgaacgagtcgggtggtacc
ggcggcatgtcacggattcctgatgtccgggtcgccggcaagacagggacttctcaggtc
gtcaagctgagagatacgcgcgggtttatcccctatcagtatcgcgatcacgccctgttc
gtggcctacgccccctatgagcaccccgaagttgctgttgcggtggtgatcgaacacggc
gagcacggaggctcggcggcggcacccattgccggcagcattctgcgcgcctacttcgaa
gggaagggggtcatccgccgaccggtcaaagccgggaagggaactgccgccggggacgac
ggctccggggaaaacgcgacatccgacgaaggggcgcagccccgcgaggatcaggaatag

DBGET integrated database retrieval system