Bacillus sp. X1(2014): HW35_07430
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Entry
HW35_07430 CDS
T03242
Name
(GenBank) DNA-directed RNA polymerase subunit N
KO
K03092
RNA polymerase sigma-54 factor
Organism
gst
Bacillus sp. X1(2014)
Pathway
gst02020
Two-component system
gst02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gst00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HW35_07430
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HW35_07430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gst03021
]
HW35_07430
Transcription machinery [BR:
gst03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HW35_07430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Sigma70_r4
HTH_23
HTH_11
Sigma70_r4_2
HTH_17
HTH_38
HTH_Crp_2
GerE
HTH_20
HTH_IclR
Xre-like-HTH
MarR_2
HTH_Tnp_ISL3
HTH_24
HTH_3
HTH_28
HTH_6
Fe_dep_repress
HTH_5
MarR
HTH_21
Motif
Other DBs
NCBI-ProteinID:
AIM16147
LinkDB
All DBs
Position
complement(1403107..1404429)
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AA seq
440 aa
AA seq
DB search
MNLKAGLWQQQTLKLMMTQELTQAIALLQYSAQELTAFLENKALENPLLQIEHVNVRPMN
PLIDRNRRKHEKTEKDWIEQIADRPFSWEEQLISQLNLKKLPAEQLKVIRHLINNLDENG
YFNGDLNEIARNLKVPVELAEDGLAVLQTLEPVGIGARNLQECLLIQIDYELPDNDLAKK
IVTDYFVPFAEKKWRRIAKELQVTLKDIQEIFDQIQLLNPKPGAILGREAAAYIIPDVIV
EQSDEGWIVRMFDDPIPKISFNESYFNRFKDKDRQVSRFLQEKVQDYQWIIKSIEQRRET
LTKVVTKIVERQSAFFQKGPQFLAPMTMKEIAAELDIHESTVSRAVREKYVQTPVGTFTL
KSFFTSTIQTTAGDETTSSTQVKNAIRKLIEMENKQKPLSDQEIAEQLKAMEGMVVSRRT
IAKYRDQLGIPSSTKRKRFN
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgaaggcgggtttatggcagcagcaaacacttaaattaatgatgacccaggaa
ctgactcaggcgattgcactgctgcaatattcagcgcaggagctaacagcttttttggag
aataaggcacttgaaaatcccctattacaaattgaacatgtgaatgtccgtccgatgaac
ccattaattgatagaaatcgtaggaaacatgaaaaaacggaaaaagactggattgaacag
attgccgatagaccattttcatgggaagaacaactaatctcgcaattgaatcttaaaaaa
ttaccggcggagcagttaaaggtcattcgtcatcttataaataatcttgatgaaaacggt
tactttaacggtgacttaaatgaaattgcccggaatctaaaggttccggtcgaacttgcg
gaggatgggttggcagtccttcaaacactagaaccggtagggatcggggcaagaaatctt
caggagtgcttactcattcaaattgactatgaacttcctgataacgatttagccaaaaaa
attgtcaccgattattttgttccatttgcagaaaagaaatggagacggattgcaaaggaa
cttcaagtaacacttaaggatattcaagaaatatttgatcaaatccaattattaaatcct
aagcccggggctattttagggagagaggctgccgcttacattatcccagatgtcattgtc
gaacaatcagacgaagggtggatcgtccgcatgtttgatgatcctattccaaaaattagt
tttaatgaatcctatttcaatagatttaaagacaaggaccgtcaagtaagccggtttttg
caggaaaaggtacaagattaccagtggattatcaaaagtattgaacagagaagagaaaca
cttacaaaggttgtaacaaagattgtcgaaaggcagtcggcattctttcaaaaaggccca
caatttttggcgccaatgacaatgaaagaaattgctgctgaacttgatatacacgaatct
accgttagccgagccgtacgggaaaaatatgttcaaacaccggttgggacctttacctta
aaatcatttttcacaagcacgattcaaacaacggcaggagatgaaaccacctcctctact
caagtcaaaaatgcgattagaaaattaatcgaaatggaaaataaacaaaaaccattgtct
gatcaagaaatcgccgagcaactaaaggcaatggagggtatggtagtatcaaggagaacc
atcgccaaataccgggatcagttaggcatcccatcctcaacgaaaagaaagagatttaat
taa
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