Bacillus sp. X1(2014): HW35_10100
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Entry
HW35_10100 CDS
T03242
Name
(GenBank) recombinase RecR
KO
K06187
recombination protein RecR
Organism
gst
Bacillus sp. X1(2014)
Pathway
gst03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HW35_10100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gst03400
]
HW35_10100
DNA repair and recombination proteins [BR:
gst03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HW35_10100
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HW35_10100
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GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
Toprim
RecR_C
RecR_ZnF
HHH
HHH_8
HHH_5
IMS_HHH
zf-RING_16
Motif
Other DBs
NCBI-ProteinID:
AIM16580
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Position
1948587..1949183
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AA seq
198 aa
AA seq
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MHYPEPISKLIDSFMKLPGIGPKTAARLAFFVLSMKEDTVLDFAKALVNAKRNLTYCSVC
GHITDQNPCYICEDQRRDRSIICVVQDPKDVIAMEKMKEFNGLYHVLHGAISPMDGIGPE
DINIPDLLKRLQDETVQEVILATNPNIEGEATAMYISRLLKPSGIKTTRIAHGLPVGGDL
EYADEVTLSKALEGRREV
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgcattatcctgaaccgatttcaaagttgattgatagttttatgaaactgcccggcatt
ggccctaaaacagctgcacgtctagcttttttcgtcttaagtatgaaagaggataccgtc
ctcgattttgctaaagcgttagtcaatgcgaaacgaaatttaacttattgctcagtctgc
ggccatatcacagatcaaaatccttgttatatttgtgaagatcagcgtcgagataggagc
atcatatgtgtagtgcaggatccgaaagatgtaattgctatggaaaaaatgaaggaattt
aacgggttataccatgtcttgcatggagcaatttctcctatggatgggattgggcccgag
gatataaatattcctgatttgttaaagcgtctccaagatgaaacggtacaagaggtaatt
ctagcaacgaatcctaatattgaaggcgaagcaacagctatgtatatttcacgtttgtta
aagccttcaggtattaaaacaacaagaattgcccatggtctgccggttggaggggatctt
gaatacgcagatgaggttaccttatcgaaagctttagagggcagaagggaagtataa
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