Bacillus sp. X1(2014): HW35_10680
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Entry
HW35_10680 CDS
T03242
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
gst
Bacillus sp. X1(2014)
Pathway
gst03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gst00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HW35_10680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gst03021
]
HW35_10680
03400 DNA repair and recombination proteins [BR:
gst03400
]
HW35_10680
Enzymes [BR:
gst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HW35_10680
Transcription machinery [BR:
gst03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HW35_10680
DNA repair and recombination proteins [BR:
gst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HW35_10680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Peptidase_M23
BRE
Motif
Other DBs
NCBI-ProteinID:
AIM16662
LinkDB
All DBs
Position
2051969..2055568
Genome browser
AA seq
1199 aa
AA seq
DB search
MLDVNNFEYMKIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTEPGDTALEKKQLLSEKEYRAYREKYGSKFQASMGAEAIKKLLS
DIDLDKEVDMLKEELKTAQGQRRTRAIKRLEVLEAFRNSGNEPSWMVLDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVEKGLAHNIKSAKRKIERVSPDVWDVLEEVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARLLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTMEREGAIGEGMIFKDANEAILAYHNGYVHLHSRIAVY
AGSLGNETFTEEQNNKLLITTVGKLIFNEILPKSFPYINEPTKHNLEVETPEKYFVEKGE
NVKEKIKNMPIIDPFKKKILGNIIAEVFKRFKITETSKMLDRMKDLGFKYSTKAGITVGV
ADIVVLGEKEQILQEAQAKVDNVMKQFRRGLITEDERYDRVISIWSQAKDTIQGKLMKSL
NKTNPIFMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVREDDCGTDRGFTIRALKDGTEIIETLE
ERLIGRYSRNTIRHPETKEILVRENELITEDIAAAIVGAGIEEVKIRSAFTCNTRHGVCK
KCYGRNLATGQEVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGNDITQGLPRIQEIF
EARNPKGQAVISEIDGVVVGINEGRDRQHEIVIQGEVESRTYNAPFTARLKVAAGDRVER
GEELTEGSVDPKELLKVKDVYSVQEYLLREVQKVYRMQGVEIGDKHVEVMVRQMLRKIRV
SDAGETDVLPGTLLDIHQFTDANEKALMEGKMPATGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMQRYRKAEPVLRDTTSEEPITIE
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
ttgctggacgttaataattttgagtatatgaaaattggtcttgcttcaccggataaaatc
cgttcctggtcttatggtgaagttaaaaaacctgaaaccataaactatcgtacgttaaag
ccggagaaagacggtctattctgtgaaagaattttcggcccaactaaagactgggaatgt
cattgtggaaaatacaaacgtgtccgttataagggcgttgtttgtgatcgatgcggagtg
gaagttacaagagcgaaggtccgccgtgagagaatgggccatattgaactggcagcacct
gtatcccatatttggtactttaaaggtattcctagccgtatgggattagtgctagatatg
tctccaagggcactggaggaagtaatttattttgcttcctatgttgttacagaaccagga
gatactgccctagaaaagaaacagcttttatcggaaaaagaataccgcgcctatcgagaa
aaatacggaagcaaattccaagcttctatgggtgcggaggctattaaaaagcttctttct
gatattgatttagataaagaagtagatatgttaaaagaagagttgaaaacagcacaaggt
caacgccgtacacgtgcgattaaacgtcttgaggttctagaagcgttccgtaattcaggt
aacgaaccttcttggatggtgcttgatgtgctaccggttatcccaccagaactacgtccg
atggtccaattggatggtggtagatttgcaacatctgaccttaatgacttatatcgtcgc
gtaattaaccggaacaaccgtttaaaacgtttattggatcttggtgcaccaagtattatt
gttcaaaacgaaaaacggatgcttcaagaagcggttgacgctcttatcgataacggtcga
cgtggccgcccggtaacaggacctggtaatcgtccattaaaatctctttcccatatgtta
aaaggtaagcaaggacgtttccgtcagaacttgctaggaaaacgtgtagactattctgga
cgttcagttatcgttgttggaccgaacttgaaaatgtatcagtgtggtcttccaaaagaa
atggcacttgaactatttaagccatttgtaatgaaagagctagttgaaaaaggattggct
cacaatattaaatcagctaagcgtaaaattgaacgagtctctccagatgtttgggacgta
cttgaagaagtcattaaggagcacccggtattattaaaccgtgccccaacgcttcataga
ttaggtattcaggcctttgaaccaacattagtagaaggccgtgccatccgtcttcacccg
ttagtttgtacggcttataacgcagactttgacggtgaccagatggctgttcacgtacct
ctatctgctgaagcacaggcagaagcacgtctcttaatgttagctgcacaaaacattcta
aaccctaaagatggaaaaccggttgttactccttctcaggatatggtattaggaaactat
tatttaacgatggaaagagaaggcgcaatcggcgagggtatgatatttaaagatgcaaat
gaagccattcttgcctatcataatggttatgttcacttgcattcacgtattgcagtttat
gcgggttcattaggtaatgaaacatttacggaagaacaaaacaataagttgcttataaca
acagttggtaaacttatttttaatgaaattcttccgaaatcattcccttacattaatgaa
ccaacaaagcataatctagaagttgaaacacctgaaaagtatttcgttgaaaaaggcgaa
aacgttaaagaaaaaattaaaaatatgcctataatcgatccgtttaaaaagaaaatcctt
ggaaacatcattgcggaagtatttaaacgtttcaaaattacggaaacgtccaaaatgctt
gaccggatgaaagatcttggattcaaatactcaactaaagcgggtatcactgttggggtt
gccgatatcgttgttcttggagagaaagagcaaattcttcaagaagcacaggcaaaagtg
gataatgtaatgaagcagttcagacgcggtctcattactgaagatgaacgttatgaccgt
gtaatctccatttggagccaggcgaaggacactattcaaggtaaacttatgaaatccttg
aataaaacgaacccgatctttatgatgagtgattccggagcccgtggtaacgcttcgaac
tttactcagcttgctggtatgcgtggtctcatggcgaacccggccggacgtattattgaa
ttaccaatcaaatcaagtttccgtgaaggattaaccgtattagagtactttatctctaca
cacggagctcgtaaaggtcttgcagatactgctcttaagactgctgactctggttactta
acccgccgtcttgtggatgtggctcaagatgttattgtccgcgaggatgattgcggtaca
gaccgcggctttacaatccgtgctttaaaagatggtacggaaataattgaaacattagaa
gaacgtctaatcggtcgttattctcgtaatacaatcagacaccctgagacaaaggaaatc
cttgttcgagagaatgaactgattaccgaggatattgctgctgccattgttggtgcgggc
atcgaagaagtaaaaattcgttctgctttcacatgtaatacccgtcatggagtatgtaag
aagtgttacggccgcaacttggcaactggacaagaagttgaagtgggtgaagcggttggt
attatagctgctcaatctattggtgagccaggaactcagttaacaatgcgtaccttccat
accggtggggtagcgggtaatgatattactcaaggtttaccacgtatccaagagattttt
gaagcacgtaatcctaaagggcaggcggtaatttctgagatcgatggtgtagttgtaggt
attaatgaaggccgtgaccgacaacatgaaattgtcattcaaggtgaagttgaatctaga
acttacaatgcgccatttactgcaaggttaaaggttgctgcaggagaccgtgtagaacgc
ggagaagaattaacggaaggttccgttgatccgaaagaattactaaaagtaaaagatgtg
tattctgtacaagaatatctgctccgcgaagtacaaaaggtttaccgcatgcaaggggta
gaaattggcgataagcacgttgaggtaatggttcgtcaaatgcttcgtaagattcgagta
agcgatgctggtgaaacggatgtattacctggcacattattggatattcatcagtttacg
gatgcaaacgaaaaggcgttaatggaaggcaaaatgccggcaacaggccgtcctgtatta
cttggtattaccaaggcgtcgcttgaaacagattccttcctttcagcagcatcattccaa
gaaacgacaagggttcttacggatgcagcgattaaaggtaaacgtgatgaattacttggc
ttaaaagagaatgttatcatcggtaaacttgttccagccggaacaggtatgcagcgttac
cgcaaagcggaacctgtattaagagatactacttccgaagagccaattacaattgagtaa
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