Bacillus sp. X1(2014): HW35_16805
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Entry
HW35_16805 CDS
T03242
Symbol
polC
Name
(GenBank) DNA polymerase III PolC
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
gst
Bacillus sp. X1(2014)
Pathway
gst03030
DNA replication
gst03430
Mismatch repair
gst03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HW35_16805 (polC)
03430 Mismatch repair
HW35_16805 (polC)
03440 Homologous recombination
HW35_16805 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gst03032
]
HW35_16805 (polC)
03400 DNA repair and recombination proteins [BR:
gst03400
]
HW35_16805 (polC)
Enzymes [BR:
gst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HW35_16805 (polC)
DNA replication proteins [BR:
gst03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HW35_16805 (polC)
DNA repair and recombination proteins [BR:
gst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HW35_16805 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
RNase_H_2
HHH_3
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AIM17704
LinkDB
All DBs
Position
3232617..3236942
Genome browser
AA seq
1441 aa
AA seq
DB search
MSEHALGKKERFLLLLQQLQLTEDAVVSHFQNAQIDRLVVEKKARKWHFHFLLENILPFH
VYTRFTTQLQRAFSNIATVSYDIKVINQQASEELIREYWSHCIQQLDGISPPLLKLLNEQ
MPEVKGNKLTVFVRNEAEGLALKRKYGSIIGDTYQKFGFPSYSFDIALKKEEKNEEYEQF
LLAKQKEDQERALMAMVEMQKQEEENEASTSDLPEGPLTIGLTIKDDSDLRSLIDIVDEE
RRVTVEGYIFDTEIRELRSGRSLLTFKITDYTSSIMVKMFSRDKEDAALFQRVKKGMWVR
VRGSIQNDTFVRDLVMIGNDINEIKPIERKDTAPEGEKRVELHLHTPMSQMDAVTPVGTL
IAQAKKWGHKAIAITDHAVVQSFPEAYSAGKKNDMKILYGVEANLVDDGVPITFNDAHRL
LAEDTYVVFDVETTGLSAVYDTIIELAAVKVKGGEIIDRFESFANPHHRLSATTINLTGI
TDDMVQNAPEVEEVLRKFHEWMGDSILVAHNASFDMGFLNVGFKKIGLDKASNPVIDTLE
LARFLYPELKNHRLNTLAKKFDVELTQHHRAIYDAEATGYLLVKMLKDAAEKGITYHDEF
NDHMGKGNAYQRARPFHCTLLAQNEVGLKNLFKLVSISHVDYFYRVPRIPRSVLQKYREG
ILVGSGCDKGEVFEGMMQKSPDEVESIASFYDYIEVMPKPVYAPLLEMELVRDEKALEQI
IKNIVALGDKLGIPVVATGNVHYLNENDKIYRKILISSQGGANPLNRHELPDVHFRTTNE
MLEAFSFLGEEKAKEIVVTNTNKIADMIEPIKPIKDDLYTPRIEGAEEEIREMSYAMARK
IYGDPLPEIVEARLEKELKSIIGHGFAVIYLISHKLVKKSLDDGYLVGSRGSVGSSFVAT
MTEITEVNPLPPHYVCPSCKHSEFFDDGSVGSGFDLPDKDCPKCGTKYKKDGHDIPFETF
LGFKGDKVPDIDLNFSGEYQPRAHNYTKVLFGEDNVFRAGTIGTVADKTAFGYVKAYQQD
HNLQFRNAEIERLASGCTGVKRTTGQHPGGIIVIPDYMDVYDFTPIQYPADDKTSEWRTT
HFDFHSIHDNVLKLDILGHDDPTVIRMLQDLSGIDPKTIPVDDPEVMKIFSGTESLGVTP
EQIMCKTGTLGIPEFGTRFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIQNNI
CTLSEVIGCRDDIMVYLIYQGLEPSFAFKIMESVRKGKGLTEEMEAEMRKHDVPEWYIDS
CKKIKYMFPKAHAAAYVLMAVRIAYFKVHMPLYYYAAYFTVRAEDFDIETMSRGSEAIRA
KIEEINAKGLEASNKEKNLLTVLEIALEMTERGFSFQNYDLYKSAASEFIIEGNSLIPPF
DSIPGLGTNAAINIVKAREEGEFLSKEDLQQRGKVSKTIMEYLEKQGCLKSLPEQNQLSL
F
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgaacatgccttaggcaaaaaagagcgattcctactcttgctccagcagctacaa
ctaacagaagatgctgtggtatcgcactttcaaaatgcacaaatagatcgattagtcgta
gaaaaaaaagcgagaaaatggcattttcattttttacttgaaaacattcttccctttcat
gtatatacccgttttaccacccaacttcaaagggcgttttccaatattgcgacagtttcc
tatgatataaaggtaattaatcaacaagcatccgaggaattaataagggaatattggagt
cattgtattcaacagcttgatgggatctctccaccacttttaaagcttttaaatgagcag
atgccagaggtaaaaggaaataaattaactgtttttgtaagaaatgaagcggaaggtctg
gctttaaaacgtaaatatggttctataattggagatacctaccagaaattcggttttcct
tcttattcatttgatattgctttgaaaaaggaagagaaaaacgaagagtatgaacagttt
ttattagcgaagcaaaaagaagatcaagaacgggctttaatggcaatggtagaaatgcaa
aaacaagaagaagaaaatgaagcttcaacttctgatctccctgaaggaccgctaaccatt
ggattgacgattaaggatgacagtgatcttcgcagtttaattgatattgttgatgaagaa
agaagagttactgttgaaggatacatttttgacacagaaattcgtgagcttagaagcgga
cgttccctcttaacctttaaaattaccgattacacaagctctattatggtcaaaatgttt
tcacgggataaagaggatgcagccctttttcaacgtgttaagaaggggatgtgggtccgt
gttagaggaagtattcaaaatgacaccttcgtacgcgatcttgtgatgattggtaatgat
attaacgaaatcaaaccaatcgagcgcaaagatacagcaccagagggtgaaaaacgcgtc
gaacttcatttgcataccccaatgagtcaaatggacgctgttacccctgtagggacactt
attgcccaagcaaaaaagtgggggcataaagccattgctataacggatcatgcggttgtc
caatcttttccggaagcatatagtgcgggtaaaaaaaatgatatgaaaattctctatggg
gttgaagcaaatttagtagatgacggcgtaccaataacctttaatgatgcccaccgatta
ctagctgaagacacttatgttgtatttgacgtggaaacaacaggactttcggcagtgtat
gataccatcattgaactggctgctgttaaggtaaaaggtggagaaatcattgaccgattc
gaatcgtttgctaatcctcaccaccggttatctgctacaacgatcaatttaaccgggatt
acagatgatatggtgcaaaatgcaccagaagtagaggaagtactccgtaaattccatgaa
tggatgggagattccattttggttgcccacaatgcatcttttgatatggggttccttaat
gtaggctttaagaagataggattggataaagcgagtaaccctgtaatcgatacacttgaa
cttgcacgttttctgtacccggaattaaaaaatcaccgcttaaatacattggcaaaaaag
tttgatgtcgaattaacccaacatcaccgtgccatctatgatgcggaagcaaccggctat
ttattggtgaaaatgttaaaggatgctgcggaaaaaggaattacttatcatgatgaattt
aatgatcatatggggaaaggaaatgcatatcagagggcccgtccattccactgtactttg
ttggcacaaaatgaggtagggttaaaaaatttatttaaattagtttccatctctcatgtt
gattatttttatcgtgttccgagaattccaaggtctgttttacaaaaatatcgggaaggc
attttggttggttctggatgtgataaaggagaagtatttgaaggcatgatgcaaaagtct
ccagatgaagtagagtccattgcatccttctatgactatattgaggtcatgccaaaaccc
gtctatgccccattgctagaaatggagctagtacgtgatgaaaaggcattagagcaaatt
ataaaaaatattgttgccctcggggataaacttgggattccagtagtggcaacaggtaat
gttcattatttaaatgaaaatgataaaatataccggaaaattttaattagctcgcaaggc
ggggccaatcctctgaatcggcacgaattgccagatgtccattttagaacgaccaatgaa
atgctggaagctttttcgttcttgggagaagaaaaagcaaaagaaattgttgtcacgaat
accaataaaattgctgatatgatcgaaccgattaaaccaattaaggacgatttgtatact
ccgagaattgagggtgccgaggaagaaatacgggaaatgagttatgccatggcccgaaaa
atttacggtgacccgcttccggaaattgttgaagcccgcttggagaaggaattaaaaagt
atcattggtcatggatttgcagttatctatttaatttcacataaactagtaaaaaaatca
ttagatgatggttatcttgtaggatcacgtggatcagttggatcatcctttgtagctact
atgactgaaattacagaggttaatcctttgccaccacattatgtatgtccgtcatgcaag
cattcggagttttttgatgacggatctgttgggtcagggtttgatttgcctgataaagat
tgcccaaaatgtggaacaaagtataagaaggatggccatgatattccgtttgaaacgttc
cttggcttcaaaggagacaaggttccggatatcgatttaaacttttctggtgaataccag
ccacgggcccataactataccaaagttctgttcggtgaggacaatgttttccgtgcagga
accatcggcaccgttgccgataaaacagcatttggctatgtaaaagcctatcaacaggat
cacaacctacaatttcgtaatgctgaaattgaacggcttgcttctggctgtactggtgtt
aaaagaacaactggtcagcatcctggtggaatcatcgttatccctgattatatggatgta
tacgattttacccctattcagtatcctgctgatgataaaacatctgaatggagaacaact
cattttgatttccattccattcacgataacgtccttaagctggacatacttgggcacgat
gatccgactgttattagaatgcttcaggacttgagtggaattgatcctaaaacaatacca
gtggatgatcctgaagtaatgaaaatctttagtggtactgaatcacttggtgtaacacct
gaacagattatgtgtaaaaccggaacacttggcattcctgaatttggtacccgctttgtg
cgtcagatgttggaagatacaaagccgacaactttttcagagttggttcagatctcaggt
ttgtcacacggaacagatgtatggttaggaaatgcacaggaattaatccagaataatatt
tgtacattaagtgaagtaatcggctgtcgggacgatatcatggtttatctcatttaccaa
ggactcgagccatcttttgcctttaaaattatggaatctgtccgaaaaggtaaagggtta
acagaggaaatggaagcagaaatgaggaagcatgatgtgccggaatggtatatcgactca
tgtaaaaaaattaaatatatgttcccgaaggcgcacgctgcagcatacgtattaatggct
gttcggattgcttactttaaagtgcatatgccactttattattatgcagcctatttcacc
gttcgggcagaagattttgatatagaaacaatgtcacgtggttcggaagccatacgtgca
aagattgaagaaattaatgcaaagggccttgaagcttccaataaagagaaaaacttatta
accgtattggaaattgcccttgaaatgactgaacgaggattcagtttccaaaactatgat
ttatataaatcagctgcgtctgaatttattatcgaagggaattcattaattccaccgttc
gattcgattcctggtctcggaacaaatgcagcaataaatattgtgaaagcaagagaggaa
ggagaatttctctctaaggaagacctgcaacagcgggggaaagtttcgaaaaccattatg
gagtacttggaaaaacagggctgcttaaaatctcttcctgaacaaaatcagctttctttg
ttctag
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integrated database retrieval system
