Gordonia terrae: BCM27_17380
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Entry
BCM27_17380 CDS
T04440
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
gta
Gordonia terrae
Pathway
gta03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BCM27_17380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gta03000
]
BCM27_17380
03400 DNA repair and recombination proteins [BR:
gta03400
]
BCM27_17380
Enzymes [BR:
gta01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
BCM27_17380
Transcription factors [BR:
gta03000
]
Prokaryotic type
Helix-turn-helix
AraC family
BCM27_17380
DNA repair and recombination proteins [BR:
gta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BCM27_17380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HHH
Motif
Other DBs
NCBI-ProteinID:
ANY24329
UniProt:
A0A4V0AVT7
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All DBs
Position
3865106..3866662
Genome browser
AA seq
518 aa
AA seq
DB search
MTTRIATDADTAGTAPDFDRCYRAVQARDARFDGQFFVTVRTTGIYCRPSCPAQTPRPAN
VGFVLTAAAAQQQGFRACRRCAPDAVPGSPLWNINADMSARAMRLIADGVVEREGVDGLA
TRLRYSPRHITRVLTRHLGAGPLALARAHRATNARVLIQCTTMPMTDIAFAAGFASVRQF
NDTVRAVFGLTPTELRRLPRRKNTPNGTDSAPGSVTLRLPFRAPYRWPWMRWFLDAHAAA
GVESVVDDPDSPHGWRYRRILTLPHGIASAEVEPRDDHAVVALRGLDMRDLGVAVNRIRR
LLDLDADITAAQDALAADDTMRPLLERAPGLRAPGSLDPAETVIRTMLGQQVSLAAARNQ
IDRLVDVLGEPVGDWFGPAPGDASTADGEPPSKSFPTPSVIAARGHEVLRGPRRRVDAVI
GVAGALADKRVEPHVGVDASDLRAQLLELPGIGPWTADIVTMRVTGDPDVLLTNDLVVVR
AAADLGIDLRTTDHWAPWRSYATMHLWRHRLDAAGQIV
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
gtgaccacacgcatcgcaaccgacgccgacaccgcgggaaccgcgccggacttcgaccgg
tgttaccgcgcggtgcaggcccgcgacgcccgcttcgacggacagttcttcgtcacggtc
cgcaccaccggtatctactgccgtccgtcgtgcccggcccagacaccccggcccgccaac
gtcggattcgtgctcaccgccgcagcggcccagcagcagggcttccgtgcctgccgacgg
tgcgcgcccgatgccgtacccgggtctccactatggaacatcaacgccgacatgtccgct
cgcgcgatgcggctcatcgccgacggggtcgtcgaacgcgagggagtcgacggactcgcc
acgcgcctgcggtactcgccccggcatatcacccgcgtgctgacccggcatctgggcgcc
gggccgctcgccctcgcccgggcgcatcgggccaccaacgcgcgggtgctcatccaatgc
acgacgatgccgatgaccgacatcgccttcgccgccggattcgccagcgttcgtcagttc
aacgacaccgtccgcgcggtcttcgggctcacccccaccgaactccgccgacttccccgt
cgcaagaacacgccgaacggcaccgattccgcgcccgggagcgtcaccctacgactgccg
ttccgcgcaccgtaccgctggccgtggatgcggtggttcctcgacgcgcacgccgccgcg
ggcgtcgagtccgtcgtcgacgacccggacagcccccatggctggcgctaccgtcgaatt
ctcacgctgccgcacggcatcgcctcggcagaagtggagccgcgggacgaccatgccgtg
gtggcgctccgtggactcgacatgcgcgatctgggtgtcgcggtcaaccggattcgtcgt
ctgctcgacctcgacgccgacatcaccgccgcgcaggacgcgctcgccgcggacgacacg
atgcgaccactgctcgaacgcgctcccgggctccgggcgcccggcagtctcgacccggcc
gagacggtcatccgcaccatgctcggtcaacaggtcagcctcgccgccgcccgcaaccag
atcgaccggctcgtcgatgtactcggtgaacccgtcggcgactggttcggccctgcgccc
ggcgacgcttcgacggcagatggcgagccgccgtcgaaatccttcccgacgccgagcgtg
atcgctgcccgcggacacgaggtcctgcgcggaccgaggcggcgggtcgacgccgtgatc
ggtgtcgccggggcactcgccgacaagcgagtggaaccgcatgtgggggtcgatgcgtct
gatcttcgtgcccagcttctcgaactgcccggcatcggcccctggaccgccgacatcgtc
acgatgcgagtcaccggcgatcccgacgtcctgctcacgaacgatctcgtcgtcgtccga
gcagccgccgacctcgggatcgatctgcgcacgaccgatcactgggcaccctggcgctcg
tacgcgaccatgcatctgtggcggcaccgactcgacgccgccgggcagatcgtgtga
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