Geobacillus thermodenitrificans: GTNG_2412
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Entry
GTNG_2412 CDS
T00496
Name
(GenBank) ATP-dependent RNA helicase, DEAD/DEAH box family
KO
K18692
ATP-dependent RNA helicase CshB [EC:
3.6.4.13
]
Organism
gtn
Geobacillus thermodenitrificans
Brite
KEGG Orthology (KO) [BR:
gtn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtn03019
]
GTNG_2412
03009 Ribosome biogenesis [BR:
gtn03009
]
GTNG_2412
Messenger RNA biogenesis [BR:
gtn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GTNG_2412
Ribosome biogenesis [BR:
gtn03009
]
Prokaryotic type
rRNA helicases
GTNG_2412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ABO67757
UniProt:
A4IR03
LinkDB
All DBs
Position
complement(2520702..2522012)
Genome browser
AA seq
436 aa
AA seq
DB search
MAETQFTRFPFQPFVIEAIQALRFYKPTEIQERIIPRALRGESMVGQSQTGTGKTHAYLL
PIIEKIDPERAEVQAVITAPTRELATQIYHETLKITKFCPKDRMIVARCFIGGTDKQKAL
EKLHVQPHIVIGTPGRINDFIREQALDVHTARTLVVDEADLMLDMGFITDVDQIAARMPK
ELQMLVFSATIPEKLKPFLKKYMENPTFIQVEPKQTANKNIEHVLIPLRGREKVKLLYDV
LVSYNPYLAIVFVNTRKRADEVADQLAEQGLKVGVLHGDLTPRERKKMMNQIRDLEFQYV
VATDLAARGIDIEGVSHVINYELPDDLQFYIHRAGRTARAGYSGIAATIYEPTDQDAIAR
LEKMGISFVHRDLVRGEWKDLPPWNRRSKRAGEKEDDLALLVAKLKKAKQVKPGYKKKLR
AELEKKKKRLSRFKKS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcagagacgcaatttacccggtttccatttcagccatttgtgatcgaggcgattcaa
gcgcttcgtttttataagccgacggaaattcaagagcgcatcattccgagagcattgcgt
ggggaaagcatggttggccagtcgcagactgggacgggaaaaacacacgcctatttattg
ccgatcatcgaaaagatcgacccggagcgcgctgaagtgcaggcagtcattacagcgccg
acgcgcgagttggcgacgcaaatttaccatgaaacgttaaagatcacgaaattttgcccg
aaagaccggatgattgtcgctcgctgtttcatcggtgggacggataagcaaaaggcgctt
gaaaagctccacgtgcagccgcatattgtgatcggtacgcctgggcgcattaacgatttt
atccgcgagcaggcgcttgatgtacacacggcgcgcaccctcgtcgtcgatgaagccgat
ttaatgctcgatatggggtttatcaccgatgtcgaccaaatcgcggcccggatgccgaaa
gagctgcaaatgcttgtcttttcggcgacgattccggaaaagctgaagccatttttgaaa
aaatatatggaaaatccgacattcatccaggtcgagccgaaacagacagcgaataaaaac
attgagcatgtgctcattccactacgcggccgtgaaaaggtcaagctgctttatgatgtg
cttgtcagctacaatccatatttagccattgtgttcgtgaatacgagaaagagggctgat
gaagtcgccgatcagcttgccgaacaaggactgaaagtcggtgtattgcacggtgatttg
acgccgcgcgagcggaaaaagatgatgaaccaaattcgcgatttggagtttcaatacgtc
gttgccactgatttggcggcgcgcggcattgatatcgaaggcgtgagccatgtcatcaac
tatgagttgcccgatgatttgcagttttacattcatcgagctgggaggacggcacgcgcc
ggttatagcggcattgcggcgaccatttacgaaccgaccgaccaagatgcgattgctcga
ttggaaaaaatggggatttcatttgttcatcgcgacctcgtgcgtggtgaatggaaggat
cttccaccttggaatcggcggagcaagcgagctggtgagaaggaagatgacctcgcgctg
cttgttgcgaagctgaaaaaagcgaaacaagtgaaaccgggctataagaaaaagctgcgc
gccgagcttgagaagaagaaaaagcggctgagccgcttcaaaaaatcgtag
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