Geobacillus thermodenitrificans: GTNG_2604
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Entry
GTNG_2604 CDS
T00496
Name
(GenBank) Excinuclease ABC, subunit C
KO
K03703
excinuclease ABC subunit C
Organism
gtn
Geobacillus thermodenitrificans
Pathway
gtn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gtn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GTNG_2604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gtn03400
]
GTNG_2604
DNA repair and recombination proteins [BR:
gtn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GTNG_2604
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Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
UVR
HHH_5
HHH_2
GIY_YIG_2
Motif
Other DBs
NCBI-ProteinID:
ABO67949
UniProt:
A4IRJ5
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Position
complement(2711446..2713224)
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AA seq
592 aa
AA seq
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MTMNDRLKEKLSVLPEQPGCYLMKDKHGTVIYVGKAKSLKARVRSYFTGTHEGKTQRLVE
EIADFEYIVTSSNAEALILEMNLIKKHDPKYNVMLKGDESYPFIKITAEKHPRLLITRKV
KKDGGKYFGPYPNVQAARETKKLLDRLYPLRKCSTLPSRVCLYYHMGQCLAPCVYPVSDE
QNKAMVEQVVRFLNGGYQEVKRELTEKMHQAAEALEFERAKEYRDQIAAIEMTMEKQKIV
FNDFIDRDVFGYAYDKGWMCVQVFFLRQGKLIERDVSIFPLYQDPDEEMLTFLGQFYTKA
HHLKPKEVVLPTDIDGELVRELLGVHVVQPKKGKKKELIELANKNAAIALKEKFYFIERD
EERTIKAIERLGELLGIPTPRRIEAFDNSNIYGADPVSALVVFLDGKPAKKEYRKYKVKT
VEGPNDYESMREVVRRRYTRVLKERLPLPDLIIIDGGKGHLSAVRDVLENELGLDVPLAG
LAKDEKHRTSELIAGDPPAVVPLDRQSQEFYLLQRIQDEVHRFAVTFHRQTRQKTMLHSI
LDDIPGVGAKRKKALLNYFGSVKKMKEATVEELQRANIPRSVAEKIYEKLHE
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgaacgaccggctgaaagaaaagctgtccgtgctgccagagcagccgggctgc
tatttaatgaaagacaaacacggaacggtcatttacgtcggcaaggcaaagtcgctgaaa
gcgcgcgtccgctcgtattttaccgggacgcacgaaggcaagacgcagcgacttgtcgag
gaaattgccgattttgaatatattgttacctcatcaaatgccgaggcgctcattttggaa
atgaacttgattaaaaagcatgacccgaaatacaacgtcatgctgaaaggcgatgaaagt
tatccatttattaaaattaccgcagaaaagcatccgcgattgcttattacccgcaaagtg
aaaaaagacggcggcaaatatttcggtccgtacccgaacgtgcaggcggcccgcgaaacg
aaaaagttgctcgaccgtttatatccgctccgcaaatgctcgacgctgccttcgcgtgtt
tgcttatattaccatatgggacagtgtcttgctccgtgcgtttacccggtgtcggatgag
caaaacaaagccatggtcgagcaagtcgttcgttttttaaacggtggctatcaagaggta
aagcgggagctgacggaaaaaatgcatcaggcggccgaagcgctcgagtttgagcgggcg
aaagaataccgtgaccaaatcgcggcgattgagatgacgatggaaaaacaaaaaatcgtg
ttcaacgatttcatcgatcgcgatgtgttcggctatgcatatgacaaaggttggatgtgc
gtacaagtgtttttccttcgccaagggaagctgattgagcgcgatgtgtccattttccct
ctttaccaagacccggatgaggaaatgctcacatttttaggtcagttttatacgaaggca
caccatttaaagccaaaagaagttgtcttgccgaccgacatcgacggtgagctcgtccgc
gagctgcttggcgtccatgtcgttcagccgaaaaaagggaagaaaaaagaactgatcgag
ctggcgaacaaaaatgctgccatcgccttgaaagaaaagttttattttattgaacgcgat
gaagaaaggacgattaaagcgatcgaacggctcggggagctgctcggcattccgacgccg
cgccgcattgaggcgtttgataactcgaacatatacggagccgatccggtctcagcgctc
gttgtcttccttgacggcaagccggcgaaaaaagagtaccggaaatataaggtgaaaacg
gtcgaggggccgaacgactatgagtcgatgcgcgaagtcgtgcgccgacgctatacacgc
gtgctgaaagaaagactgccgcttcctgatttgatcattatcgatggcggaaaaggccat
ttgtccgcagtgcgcgatgtacttgaaaacgaactcggcctcgatgtaccgctcgccggg
ctggcgaaagacgaaaaacatcgcacatcggagcttattgctggtgacccgccagccgtt
gtgccgcttgacaggcaaagccaagagttttatttgctgcaacgcattcaagatgaagtg
caccggtttgcggtgacgttccaccgtcagacgcggcaaaaaacgatgctccattccatt
cttgatgacatccctggtgtcggggcaaagcgaaaaaaggcgttattaaactattttggc
tccgtgaaaaaaatgaaagaggcgacggtggaagagctgcagcgggcaaacatcccgcgg
tcggtggcggagaaaatttatgaaaaactgcacgaataa
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