Gloeophyllum trabeum: GLOTRDRAFT_107144
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Entry
GLOTRDRAFT_107144 CDS
T03130
Name
(RefSeq) histone-fold-containing protein
KO
K02326
DNA polymerase epsilon subunit 3 [EC:
2.7.7.7
]
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03030
DNA replication
gtr03082
ATP-dependent chromatin remodeling
gtr03410
Base excision repair
gtr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GLOTRDRAFT_107144
03410 Base excision repair
GLOTRDRAFT_107144
03420 Nucleotide excision repair
GLOTRDRAFT_107144
09126 Chromosome
03082 ATP-dependent chromatin remodeling
GLOTRDRAFT_107144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gtr03032
]
GLOTRDRAFT_107144
03036 Chromosome and associated proteins [BR:
gtr03036
]
GLOTRDRAFT_107144
03400 DNA repair and recombination proteins [BR:
gtr03400
]
GLOTRDRAFT_107144
Enzymes [BR:
gtr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GLOTRDRAFT_107144
DNA replication proteins [BR:
gtr03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
GLOTRDRAFT_107144
Chromosome and associated proteins [BR:
gtr03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
GLOTRDRAFT_107144
DNA repair and recombination proteins [BR:
gtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
GLOTRDRAFT_107144
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
CENP-T_C
Motif
Other DBs
NCBI-GeneID:
19298821
NCBI-ProteinID:
XP_007868346
JGI:
Glotr1_1_107144
UniProt:
S7Q026
LinkDB
All DBs
Position
Unknown
AA seq
235 aa
AA seq
DB search
MPRADSSSNLSKAPSAKNQQDAVGIENYELPKSLITKIAKSAIPENTKLQKEVVTSLVKG
STVFINYLGASAAHDVAASKQHKSISATDVLKALELLEFADMVPGLQTELQAYRDTQKKG
KQSGASKGKAKETDSPAKAKGKEKAAAVPSAVSQTDQEPQDVDEDESGNTVRVRPEEDED
MLDPEEEGDIPEEEIPEDEPEEEDEELVDNVAVEEEELQRDARGLEDTGGVETED
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgagcggactcgtctagcaacctctctaaggcgccctccgcgaaaaaccaacag
gacgcagtcggcatagaaaattatgagctaccaaagagtctaatcacgaagatcgcgaaa
tccgcgataccagagaacacgaaattgcaaaaggaggtagtcacgtccttggtgaagggc
tcgacggtgtttatcaactacttaggtgcgtctgccgcacacgatgttgccgcgtctaag
cagcacaaaagcatttccgccaccgacgtgttgaaggcgctcgagctcctggagttcgcg
gacatggtgcccgggctacagacggaactgcaagcctaccgagatacccagaagaaaggc
aaacaaagcggcgccagcaagggcaaggcgaaagaaacggactcgccagcgaaggcaaag
ggcaaagagaaggcggctgcagtcccttcagctgtctctcagaccgatcaggaacctcag
gacgtggatgaagatgaaagtgggaatactgttcgcgtgcgcccggaggaagacgaggac
atgcttgatcctgaagaggagggggatatcccggaggaggagatccctgaggacgagcca
gaggaggaggacgaggagttggtggacaatgttgctgtcgaagaggaggagctgcagcgg
gatgcacgaggactagaagatacgggtggagttgaaacggaggactaa
DBGET
integrated database retrieval system
