Gloeophyllum trabeum: GLOTRDRAFT_136792
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Entry
GLOTRDRAFT_136792 CDS
T03130
Name
(RefSeq) hypothetical protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
GLOTRDRAFT_136792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtr03019
]
GLOTRDRAFT_136792
Enzymes [BR:
gtr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
GLOTRDRAFT_136792
Messenger RNA biogenesis [BR:
gtr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
GLOTRDRAFT_136792
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
ATP_bind_1
Motif
Other DBs
NCBI-GeneID:
19303627
NCBI-ProteinID:
XP_007863284
JGI:
Glotr1_1_136792
UniProt:
S7RTJ0
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MSMDPQGTAAPSKEWVLAPETEYRFELDAGTSLAVKLTSGQAEVFGAELVEGKAYVFGYE
YPPRALVLGPENSGKTSVCKILVNYAVRTGQDWSPILVNVDPNEGGWAVPGAISAASVST
PIATSSPANTLGSAASSAPVTHSSNALLPLAYWYGHAEPKRNPLLMDRLIRNLGQNVQDR
DEEVEAVCSGLIVDTPAAFASTTGSGLKEDQRQALIKSCVDAFNINVILVVGHEKLTVEM
QRIYGGRMDVVKIPKSGGVVELDRSYRERIHSYQLHTYMYGLRIEPPSGVADATLGGEPI
TDLTLAPSSIQISFDDLSIFRVGEESMAPQSALPVGATRTVSEMQPVQVDPAKSGSRLLN
AVLALLSPPHPDESERYDEEILDLTVVGFLVITALDVPNRKMTILSPNQGSLAGRTAIVG
SFEWSEQ
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgagcatggacccgcagggcactgcggcgccatcgaaagaatgggtactcgcgcctgaa
acagaataccggttcgagctggacgccggcacatccttggctgtgaagctcacaagcggg
caagcagaagtcttcggagcggaactggtggagggcaaagcctatgtctttggatacgag
tacccgccccgggcgctcgtcctaggccccgagaactctggcaaaacttccgtgtgcaag
atattggtcaactacgccgttcgaacagggcaagactggtcccctatcctagtcaacgta
gaccctaacgagggagggtgggccgtcccaggcgcgatttccgccgcatcagtgagcacc
ccgatcgcgacctcctcgcccgcgaacacgctcggttcagcagcctcatccgcaccagtc
acgcactcctcgaacgcactccttccattagcgtactggtacgggcacgcagagcccaag
cgcaacccgctgcttatggacaggctgatccgcaacctcgggcagaatgtgcaggacaga
gacgaggaggtcgaggccgtctgctcgggtctcatcgtcgatacccccgcggcgtttgcg
tcgaccactggctcaggcctgaaggaagatcagagacaggcgctgatcaagtcctgcgtc
gacgcttttaacatcaatgtcatactagtcgtcggacacgagaagctcacagtcgaaatg
cagcgcatatacggcggtcgcatggacgtggtcaaaataccaaagtcaggaggtgtcgtc
gagctggatcgcagctaccgcgagcgcatccactcctaccagctgcatacctacatgtac
ggcctgcgcatcgagcccccttctggcgtcgccgacgccacgctcggcggggagcctatc
accgacctcacactcgcgccttcctccatccagatctccttcgacgatctctcgatattc
cgcgtcggagaagaatcaatggctccccaatcagccctgccagtcggcgcgacgcgcacg
gtctctgagatgcagcccgtgcaggtggatccggccaagagcggctcgcgcctcctgaac
gccgtcctcgcgctgctctccccgccccatcccgacgagtccgagcggtacgacgaggag
atcctcgacctcaccgtcgtcggcttcctggtgatcaccgcgctggacgtgcccaaccgt
aagatgacgatcctctctcccaatcagggttcactcgctgggcgaaccgccattgtcggt
tccttcgagtggtccgagcaatag
DBGET
integrated database retrieval system
