Gloeophyllum trabeum: GLOTRDRAFT_57794
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Entry
GLOTRDRAFT_57794 CDS
T03130
Name
(RefSeq) WD40 repeat-like protein
KO
K15542
polyadenylation factor subunit 2
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
GLOTRDRAFT_57794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtr03019
]
GLOTRDRAFT_57794
Messenger RNA biogenesis [BR:
gtr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
GLOTRDRAFT_57794
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
PROPPIN
eIF2A
NBCH_WD40
Ge1_WD40
Nucleoporin_N
IKI3
Coatomer_WDAD
WDR54
Det1
Motif
Other DBs
NCBI-GeneID:
19307198
NCBI-ProteinID:
XP_007863150
JGI:
Glotr1_1_57794
UniProt:
S7RZ12
LinkDB
All DBs
Position
Unknown
AA seq
352 aa
AA seq
DB search
MGRWALMRKLRPNPTYVPQVRPALPYIIDLLPPKAYPDNASTSLCTKFVHTSTNKIRCPV
NVVVWTPEARRVLTGSTSGEFTLWNGLTFNFETILQAHDSAVRAMTFTHAGAFLASTDQS
GVIKYFQPNMNNLAAWQGHREAIRGLSFSPDDRRFATASDDSTIRIWAFEESREERVLTG
HGWDVRCVEWHPTKGLLVSGSKDNQIKFWDPRTGTALATLHQHKNTIQALAWSPNGNLVA
SASRDQTVRVFDIRAMKEFKVLKGHKKEVCSVTWHPIHPILVTGGSEGAILHWDLTTPTP
TIPAASPQARAALPQAHDSNVWALAFHPLGHLLVSASNDHTTRFWARERPGE
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggggcgctgggcgttgatgcggaagctgaggccgaacccgacgtatgtgccgcaggtg
aggccggcgctgccgtatatcatcgacttattgccgccgaaggcgtatcctgacaatgcc
tcgacgtccctatgtacaaagttcgtgcacacgtccacgaataagatccggtgcccggtg
aacgtcgtcgtgtggacgcccgaggcgcggcgcgtgctcaccggctcgacgtcgggcgag
ttcacgctctggaacgggctcacgttcaacttcgagacgatcctgcaggcgcacgacagc
gcggtgcgcgcgatgacgttcacgcacgcgggcgcgttcctcgcgagcacggaccagagc
ggcgtgatcaagtacttccagccgaacatgaacaacctcgccgcgtggcaggggcaccgc
gaggcgattcggggcctgagttttagtccggatgatagacggttcgcgactgcgagcgat
gattcgacgattaggatttgggcgtttgaggagagtcgggaggagagggtgttgacggga
catgggtgggatgtgaggtgcgtggagtggcatccgacgaaggggctgcttgtctctggg
agcaaggacaaccagatcaagttctgggatccacggacggggaccgcgctggctaccctg
caccaacacaaaaacacgatccaggcactcgcgtggtctccgaacggcaacctcgtcgcg
agcgcgtcgcgcgaccagaccgtgcgcgtgttcgacatccgcgcgatgaaagagttcaaa
gtgctcaaggggcacaaaaaggaagtctgctcggtaacctggcacccgatccacccgatc
ctggtcaccggcggctcggagggcgcgatcctgcactgggacctcacgacacccacgccg
acgatcccggcggcctcgccccaggcgcgcgcggcgctcccgcaggcgcacgacagcaac
gtgtgggcgctcgcgttccacccgctgggccacctgctcgtgagcgcgtcgaacgaccac
acgacgcgcttctgggcgcgcgagcggccgggcgag
DBGET
integrated database retrieval system
