Gloeophyllum trabeum: GLOTRDRAFT_80778
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Entry
GLOTRDRAFT_80778 CDS
T03130
Name
(RefSeq) hypothetical protein
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
gtr
Gloeophyllum trabeum
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gtr03400
]
GLOTRDRAFT_80778
DNA repair and recombination proteins [BR:
gtr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
GLOTRDRAFT_80778
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
zf-HC5HC2H
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
19309014
NCBI-ProteinID:
XP_007869679
JGI:
Glotr1_1_80778
UniProt:
S7PW78
LinkDB
All DBs
Position
Unknown
AA seq
398 aa
AA seq
DB search
MAPRRVNARSSLADHTFPPFYACYLLKSIRTPRSNATYIGSTPNPPRRIRQHNGEISQGA
WKTQRSRPWVMQMIVHGFPSKLAALQFEWAWQHPHLSRHLKDDKGANLFTSPQKYFKTSV
LVARTMLASHPYSSWPLHVKLFTEEAAKAWNEVSRKIDANGLPLPRGFTHATELEGVDGK
SGLKGTGRTGPIDVTDDTFTSLHLEKYKGILNAGAALRCMVCSAKLHDPLDPSEIALCPN
GECTSVAHLTCLAQDFLSQTEGHAMIPRGGTCRSCHTYVLWGDIIKGCYRLKSGGVGPLP
ADEDDEERAGAAMDVSEDDDEPAEQVNSSQTSPRKRTTQKVSRKKANRSRGRGKTKEPAE
DVGEFFDIDAVSEIDEQSELDGVPSPRTKPQSRAGTER
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggcacctcgtagggtcaacgccaggtcgtctttggctgatcatacatttccccctttc
tacgcttgctacttgctaaaatcgatccgtaccccgcggtcaaatgcgacatatatcgga
agcaccccgaatcctccgagacgcatccgacaacacaacggagagataagccaaggcgca
tggaagacgcaaagaagtcgaccatgggtgatgcaaatgatagtccacggatttccttcc
aaactagcggctctgcaattcgagtgggcgtggcagcatccgcatctgtcgcgacatctt
aaagacgataaaggcgctaacctcttcacaagtccccagaagtacttcaagacaagtgtc
ttagtggcgcgcacaatgctcgcatcgcacccctactcatcttggcctctccacgttaaa
ttattcaccgaagaagctgcaaaggcatggaacgaagtatctcgtaagatagatgcgaat
ggcctgcctttacctcgcggtttcacccacgccactgagttggaaggcgtagatggaaag
tccggacttaaaggaactggcagaacaggtcccattgatgtgacagacgatacattcact
tcgttgcacctggaaaagtacaagggtatcttgaacgcgggtgcagctctgcgatgtatg
gtatgcagtgcgaaactgcatgatccgctggatccgtcggaaattgcattgtgcccgaat
ggagaatgcacatcggtagcacaccttacctgcctggcgcaagacttcctttcccagaca
gaggggcacgccatgatacccagagggggcacatgccgatcttgtcacacctacgttctg
tggggcgacatcatcaagggatgctacaggctcaaatccggaggtgtggggcctctcccg
gccgacgaagacgacgaagagagggctggggctgcgatggatgtcagtgaggatgacgac
gaacctgccgagcaagtgaattcgagtcagaccagtcctcggaagcggacaactcagaaa
gtgtcgaggaagaaggcaaacaggtctcgtggaaggggcaaaacgaaggaaccggccgag
gatgtcggggagttcttcgacatcgatgcagtgagtgagatcgacgagcagtccgaactg
gacggtgttccttctccccggacgaagcctcagtccagagcagggacagagcgg
DBGET
integrated database retrieval system
