KEGG   Guillardia theta: GUITHDRAFT_157730Help
Entry
GUITHDRAFT_157730 CDS       T02925                                 

Definition
(RefSeq) hypothetical protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
gtt  Guillardia theta
Pathway
gtt03030  DNA replication
gtt03410  Base excision repair
gtt03420  Nucleotide excision repair
gtt03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:gtt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GUITHDRAFT_157730
   03410 Base excision repair
    GUITHDRAFT_157730
   03420 Nucleotide excision repair
    GUITHDRAFT_157730
   03430 Mismatch repair
    GUITHDRAFT_157730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gtt03032]
    GUITHDRAFT_157730
   03400 DNA repair and recombination proteins [BR:gtt03400]
    GUITHDRAFT_157730
Enzymes [BR:gtt01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     GUITHDRAFT_157730
    6.5.1.6  DNA ligase (ATP or NAD+)
     GUITHDRAFT_157730
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     GUITHDRAFT_157730
DNA replication proteins [BR:gtt03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    GUITHDRAFT_157730
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     GUITHDRAFT_157730
DNA repair and recombination proteins [BR:gtt03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     GUITHDRAFT_157730
   NER (nucleotide excision repair)
    Other NER factors
     GUITHDRAFT_157730
   MMR (mismatch excision repair)
    Other MMR factors
     GUITHDRAFT_157730
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase DNA_ligase_OB_2
Motif
Other DBs
NCBI-GeneID: 17303121
NCBI-ProteinID: XP_005833397
JGI: Guith1_157730
UniProt: L1JDP5
LinkDB All DBs
Position
Unknown
AA seq 637 aa AA seqDB search
MLDTGKLSWKPGQPVPYSHLATMFEKVEKESKRLEIISLVTDCLRSVIETTPEDLLFCVY
LCVNKLAPAHEGVELGIGDMILKKALAEATGRQVKDIQSDYDKVGDLGTVAMKSRSTQRV
MFAAKSLTVQTLHKSLLQIAKMTGKDSGTLKKDKIKSLLVAAKGIETQFIVRHLQGKMRI
GLAEQTVLVALAHSIALSVPQGTKPNKQILEKVSCPCFLNQLIDSLQAAETLREVYSQLP
CYDKIVPVLLKEPINNLPLNCYLQPGIPVHPMLAHPTKGVSEVLDRFADQTFTCEYKYDG
ERGQIHMTPDGTVRIFSRNSEDNTSKYPDLIALMPKVIKEQTKSFILDAEVVAYDRETKK
ILPFQVLSTRKRKDANEDTITVQVCLFAFDILYYNGDPLIKRSFHERRELLKSTFTEVEG
SFAFAKSRDASDTEEILAFLNDAVADSCEGLMVKTLFGDSSTYEPAQRSHKWLKVKKDYI
DGMTDSLDLVPIGAFFGKGKRTGVYGAFLLACYNEETEDFEAICKIGTGISDTQLKEFYD
AFEPIIISEPKSYYQYDDSPGLLPNVWFEPKIVWEVAAADLSISPKHKAAIGLVDESRGI
ALRFPRLVRVRDDKGPEQATSSTQVAAMYRNQAVIGQ
NT seq 1914 nt NT seq  +upstreamnt  +downstreamnt
atgcttgacactggaaaactctcttggaagccagggcaacccgttccatactctcatctt
gccaccatgtttgaaaaggtcgagaaggagtcgaagcggctggaaatcatctcactggtg
acggactgtctgcgatcagtcatcgagacaactcctgaagaccttctgttctgcgtttac
ttgtgtgtgaacaagcttgctcccgcacatgagggggtggagttgggcatcggagacatg
atcttgaagaaggcgcttgctgaggcaactggccggcaggtcaaagacatccagagcgat
tatgacaaggtaggagatcttggaactgttgcgatgaaatcgaggagcacacagcgggtc
atgtttgcagcgaagtcgctgacggtacaaacgttacacaaaagtctgctgcaaatcgcc
aagatgacggggaaagattcagggactttgaagaaggacaagatcaagtcccttctggtc
gctgccaagggtatagagacgcagttcattgtacggcaccttcaaggcaagatgaggatt
ggccttgctgagcagacggttctcgtcgcacttgctcactccatagccttgagcgtccca
caagggacgaagcccaacaagcagatactggagaaggtgtcctgcccatgtttcctcaac
cagttgatcgattctctccaggcggcagagactttgagggaagtctacagtcaactccct
tgttacgacaagatcgttcctgtcctgctgaaggagcccatcaacaacttgccgctcaac
tgctaccttcagccaggcatcccagttcatcccatgctcgcgcacccgaccaagggggtc
tcagaggttctcgaccgctttgcggatcagaccttcacctgcgagtacaaatatgatggt
gaacgcggacaaatccacatgaccccggacggaacggttcgaatcttcagcaggaactcc
gaggacaacacctccaagtaccctgacctcatcgccctcatgccgaaggtcatcaaggaa
cagaccaagtcgttcatcttggacgcagaggtcgtcgcctacgacagggagacgaagaag
atcctacctttccaggtcctcagcacacgaaagagaaaagatgccaacgaagacaccatc
actgtccaggtctgcctgttcgccttcgacatcttgtactacaacggggacccgctcatc
aagagatcgttccacgagaggagagagcttctcaagagcaccttcaccgaggtcgaggga
tcctttgcctttgccaaatcccgagacgcctcggacacggaagagatcctggcgtttctc
aacgacgcggtggcggacagctgcgagggcctcatggtgaagactctcttcggcgacagc
tcgacctacgaaccggcgcagcgcagccacaagtggctcaaggtgaagaaggactacatc
gatggcatgacggactctctggacctggttcccatcggagctttctttgggaaggggaag
aggacgggagtgtacggcgccttcctcctcgcatgctacaacgaggagacggaggacttt
gaagctatctgtaagatcggaacaggcatcagcgacactcagctcaaggaattttatgat
gcttttgaaccgatcattatctcagagcccaagtcttactaccagtacgacgactctccc
ggcctccttcccaacgtctggttcgagcccaagatcgtgtgggaggtggcagcagcagac
ctgtccatctctcccaagcacaaggcggccatcggcctcgtcgatgagtccagggggatc
gcgttgcgctttcctcggctggtgagagtgagagacgacaagggccccgagcaggcaacc
tcatcgacacaggtagcagccatgtacagaaatcaggcggttatcggacagtga

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