KEGG   Gardnerella vaginalis 409-05: HMPREF0424_0105Help
Entry
HMPREF0424_0105   CDS       T01146                                 

Gene name
gatA
Definition
(GenBank) aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
  KO
K02433  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Organism
gva  Gardnerella vaginalis 409-05
Pathway
gva00970  Aminoacyl-tRNA biosynthesis
gva01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:gva00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    HMPREF0424_0105 (gatA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:gva03029]
    HMPREF0424_0105 (gatA)
Enzymes [BR:gva01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     HMPREF0424_0105 (gatA)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     HMPREF0424_0105 (gatA)
Mitochondrial biogenesis [BR:gva03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    HMPREF0424_0105 (gatA)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Amidase RsbU_N
Motif
Other DBs
NCBI-ProteinID: ADB14169
UniProt: D2RCU5
LinkDB All DBs
Position
124132..125673
Genome map
AA seq 513 aa AA seqDB search
MTNTQDLVKLSAADMAKAVKAKEVSSRELVEAHLAVIEAAEPEIKAFLHVSADVALEQAD
AFDKKNANGEAEGLPELAGVPIAIKDMIVTKGIPTTAASKILEGWVPPYDATVIEKLKAA
GMPILGKTNLDEFAQGSSTEHSAYQTTCNPWDTERVPGGSGGGSAAAVAAFEAPIALGTD
TGGSIRQPGALTGTVGAKPTYGGVSRFGAIAMASSLDQIGPVSRTVLDSALLQEIIGGND
RRDSTSIPAPVPPMAQAAREGARRDLKGLKVGLVKELSGDGFQPGVEARFNEAVQLLKDM
GAEVTEVSCPHFPYSLAAYYIIMPSEVSSNLARYDGMRYGLRVMPPADKPQTAANMMAAT
REAGFGDEVKRRIILGTYALSAGYYDAWYGSAQKVRTLIIRDFEEAFKKVDVLISPTSPT
TAFKFGEKMDDPLSMYMNDIATIPANMAGVPALSLPAGLSDDGLPVGIQIIAPQCHDEKM
YKPAAALEAALEEKWSGPIWKSLKAGWLDSLAK
NT seq 1542 nt NT seq  +upstreamnt  +downstreamnt
atgactaatactcaagatttagtaaagctttctgctgccgatatggcaaaagctgtaaaa
gctaaagaagtttctagccgcgagcttgttgaagctcacttggcagtaatcgaagcagcc
gagccagaaatcaaagcattcttgcatgtttctgcagatgttgcacttgaacaagcagat
gcctttgataaaaagaatgctaatggcgaagctgaaggcttacctgagcttgcaggcgtt
ccaattgccattaaagacatgattgttactaagggcattcctactactgcagcctctaag
attcttgaaggctgggttccaccttacgatgctactgttattgaaaagctcaaggcagct
ggcatgccaattcttggcaagactaatttggatgagtttgctcaaggttcttctaccgag
cattccgcttaccaaaccacttgcaacccttgggatactgagcgcgttcctggcggttct
ggcggcggttctgcagctgctgttgctgcatttgaggctcctattgctttgggtacagat
actggtggctccattcgccagccaggcgctttaactggtacagtcggcgcaaagccaact
tacggcggagttagccgttttggcgcaattgccatggcaagctccttggatcagattgga
cctgtttctcgtaccgttcttgattctgcgcttttgcaggaaattatcggtggtaacgat
aggcgcgattctacttctattccagctcctgttcctccaatggctcaagctgctcgtgag
ggtgctcgccgtgatttgaagggcttgaaggttggtttagttaaagagcttagtggcgac
ggattccagccgggagttgaagcacgctttaatgaagctgtgcaattgcttaaggatatg
ggtgcagaagtaacagaagtctcttgccctcatttcccttactctttggctgcttactac
attattatgccttcagaagttagctctaatttggctcgttacgacggcatgcgctacggt
ttgcgcgtaatgccgccagcagacaagcctcagactgctgcaaatatgatggccgcaact
cgtgaagctggtttcggtgacgaagtaaagcgccgtattattctcggtacttacgcgctt
tccgctggctattatgatgcttggtatggttctgcacagaaagttcgtacgcttattatt
cgcgatttcgaagaagcgtttaagaaagtagatgttcttatttctccaacaagccctaca
acggcatttaagtttggtgagaagatggacgatccactttctatgtatatgaacgatatt
gctacgattcctgcaaacatggctggcgttccagctttgagcctcccagctggcttaagc
gacgatggtctgcctgttggtattcagattattgctccgcaatgccatgatgaaaagatg
tacaagcctgcagcagcgttggaagcagcgctcgaagaaaagtggagcggcccaatctgg
aagtcgcttaaagctggttggctcgattcattggctaagtaa

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