Gardnerella vaginalis 409-05: HMPREF0424_0676
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Entry
HMPREF0424_0676 CDS
T01146
Symbol
tyrS
Name
(GenBank) tyrosine--tRNA ligase
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
gva
Gardnerella vaginalis 409-05
Pathway
gva00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HMPREF0424_0676 (tyrS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gva01007
]
HMPREF0424_0676 (tyrS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gva03016
]
HMPREF0424_0676 (tyrS)
03029 Mitochondrial biogenesis [BR:
gva03029
]
HMPREF0424_0676 (tyrS)
Enzymes [BR:
gva01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
HMPREF0424_0676 (tyrS)
Amino acid related enzymes [BR:
gva01007
]
Aminoacyl-tRNA synthetase
Class I (A)
HMPREF0424_0676 (tyrS)
Transfer RNA biogenesis [BR:
gva03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HMPREF0424_0676 (tyrS)
Prokaryotic type
HMPREF0424_0676 (tyrS)
Mitochondrial biogenesis [BR:
gva03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
HMPREF0424_0676 (tyrS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
S4
Acetyltransf_6
TyrRSs_C
tRNA-synt_1
Motif
Other DBs
NCBI-ProteinID:
ADB14301
LinkDB
All DBs
Position
762366..763685
Genome browser
AA seq
439 aa
AA seq
DB search
MAQVRNYKEAGFASLFEELKWRGLISQSTDEQQLAQALDGEPLTYYCGYDPTAASLHIGN
LVQLINMRHLQAAGHHPIALVGGATGLIGDPRQSGERTLNSKDIVAGWAERLRKQIGRIL
PLDGENPVRFVSNYDWVSKMSAIDFLRDVGKNFRVGTMLSKDIVARRLNSDEGISFAEFS
YQVLQGNDFLYLFDNYDVTLQLGGSDQWGNLTSGMDLIRKVRGTSVNVFTSPIITDNQGR
KFGKSEGNAMWLDPSMLSPYRFYQFWFNQPDDEVVKLLKVFTFLPKDEIERLAQQIQDDP
GSREAQRVLAWEVTSFVHGEDLTNQAIEASSALFGRGDLCNIDEQTLEAALDGVKVKAED
GSLDFAKAKVADRVVEAAVAAGLFRTVSEARRAIEAGGLYLNNERVSGVDDVLSEGSFLH
GRFALLRRGKKAIGAVERA
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggtcaggaactacaaggaagcaggttttgcttctttgtttgaagagcttaag
tggcgtggattaatttcacaatctactgatgagcagcagcttgctcaagcgcttgacgga
gaaccattaacgtattattgcggttacgatcctactgctgcttcattgcatattggtaat
cttgtacagcttattaatatgcgccatttgcaggctgcaggtcatcatcctattgcttta
gttggtggtgccactggtttgattggtgaccctcgtcaaagcggagaacgcactcttaat
tctaaggatattgtggctggctgggctgaacgtttgcgtaagcagattggcagaattttg
cctcttgatggtgaaaatcctgttcgttttgtcagcaattacgactgggtttctaagatg
tctgctatcgacttcttgcgtgatgttggtaagaatttccgtgttggcacaatgctttct
aaggatattgtggctcgtcgcttaaattccgatgaaggtatttcttttgctgagtttagc
tatcaagttttgcaaggcaacgacttcttgtacttgtttgataattacgacgtaactttg
caacttggcggttcggatcagtggggtaatctcacttccggcatggatttgattcgtaag
gttcgtggcacatccgtaaacgtgtttactagcccgattattacagataatcaaggtcgt
aagtttggtaagtcagaaggtaatgccatgtggcttgatccttctatgcttagcccttat
cgcttctaccagttctggttcaatcagcctgatgatgaagttgttaagttgcttaaggtg
ttcactttcttgccaaaagatgaaattgagcgtttagctcagcaaattcaggatgatcct
ggaagtcgtgaagctcagcgcgtgcttgcgtgggaagttacaagtttcgttcacggtgaa
gatttaacaaaccaggctattgaagcttcttccgctttgtttggacgtggtgatctttgc
aatattgatgagcagactcttgaagctgctttagatggcgttaaggttaaggctgaagac
ggtagtttagatttcgctaaggctaaagttgcagatcgtgttgttgaggctgcagttgcc
gctggtctgttccgcactgtttctgaagctcgtcgtgctattgaagcaggcggtttgtat
ctgaataatgaacgtgtaagtggtgtcgacgatgtgttaagtgagggctctttcttgcac
ggtcgtttcgctttgcttcgccgtggcaagaaagctatcggtgccgtagagcgcgcttaa
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