Gardnerella vaginalis ATCC 14019: HMPREF0421_20101
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Entry
HMPREF0421_20101 CDS
T01344
Name
(GenBank) hypothetical protein
KO
K01206
alpha-L-fucosidase [EC:
3.2.1.51
]
Organism
gvg
Gardnerella vaginalis ATCC 14019
Pathway
gvg00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
gvg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
HMPREF0421_20101
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gvg04147
]
HMPREF0421_20101
Enzymes [BR:
gvg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.51 alpha-L-fucosidase
HMPREF0421_20101
Exosome [BR:
gvg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
HMPREF0421_20101
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha_L_fucos
Motif
Other DBs
NCBI-ProteinID:
ADP38187
UniProt:
E3D7F6
LinkDB
All DBs
Position
complement(110583..112010)
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AA seq
475 aa
AA seq
DB search
MNEDYLANVRPTARQISWQRMEMYGFIHFGMNTMTDREWGLGREDPKIFNPDNLDVDQWL
DALQSAGMTGVILTCKHHDGFCLWPSKYTKHTIASSPYKNGKGDIVREVSESAYRHNMKF
GVYLSPWDRTESSYGTGKVYNDFYINQLVELLTHYGPIFSVWLDGACGEGENGKTQTYDW
QRIYNTVRALQPDAVISVCGPDVRWCGNEAGHTRSNEWSVLPTELRSAELTSSKSQQSDD
GKFSRKFASTDEDLGSRKALAHYEGDFVWYPAEVDTSIRKGWFHHDNEDNNVRSSDELFD
IWCKSVGGNSTLLLNVPPTRHGLLADSDVKILKELGDKIRKFHGRELRDYEALSIQVLSP
NAYEGNPKYLVDRKQGTALSSSKPIDFRMVFTEPTYIDGLVIEEDISKGQHVETAEIHVI
DEYGVNHHVSDVHAIGYRKILRFDAIRAVSLTVRITSIRQYVALQSCYPLVAQDE
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaggattatttagcaaatgtaaggcctacagcacgtcaaatttcttggcagcgc
atggaaatgtatggttttattcattttggaatgaatactatgacagatcgtgaatggggg
cttggtcgcgaagatccgaagatattcaatccagataatttagatgttgaccagtggctt
gatgctctacaatcggcaggtatgaccggcgtgattctaacttgcaagcatcatgatggt
ttttgcttgtggccttcaaagtacaccaagcataccattgcgtcctctccatataaaaat
ggaaaaggagatattgtgcgcgaagttagtgaatcagcttatcgacataatatgaaattt
ggcgtatacctttcaccatgggatcgtacagaatcatcatatggcactggcaaagtttac
aacgatttttatattaatcaacttgttgaattgctaacgcactatggtcctattttttcc
gtatggcttgatggtgcttgcggcgagggtgagaatggtaaaacgcaaacttatgactgg
caacgaatctataatacagtccgtgcgctgcagccagatgctgttatcagtgtttgcggt
ccagatgtgcgttggtgcggcaatgaagctggtcatacgcgctctaatgagtggagcgta
ttacctacagaattacgtagtgctgaattaacctcttcaaaatcacaacaatcagatgat
ggtaaattctctcgcaaatttgcgtctactgatgaagatttagggtctcgtaaggcgctt
gcacactacgaaggcgattttgtttggtatccagcagaagttgatacctctattcgcaaa
ggttggttccatcacgataatgaggataataatgttcgcagttctgatgaattatttgat
atatggtgtaaatctgtagggggtaactcaacacttttgttgaatgtgccaccgacacgt
catggtttgttagcagattctgatgttaaaattttaaaagaattgggcgataagattcgt
aaattccatgggcgcgaattacgagattatgaagcattatcaatacaagttttaagtcct
aatgcatatgaaggaaatccaaagtacttggttgacagaaaacagggtacagcattgtca
tcttctaagccgattgattttcgtatggtatttactgaacctacttatattgatggctta
gttattgaagaagatattagtaaaggacaacacgttgaaacagctgaaattcacgttatt
gatgaatatggagtaaatcatcatgtttcagatgttcatgccataggatatcgcaaaatt
ctacgttttgacgcgattcgtgcagtatcgttaactgtgagaataactagtattcgtcaa
tatgtagctcttcaatcatgctatccactagttgcacaagacgagtag
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