KEGG   Gardnerella vaginalis ATCC 14019: HMPREF0421_20940
Entry
HMPREF0421_20940  CDS       T01344                                 
Name
(GenBank) exonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
gvg  Gardnerella vaginalis ATCC 14019
Brite
KEGG Orthology (KO) [BR:gvg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gvg03019]
    HMPREF0421_20940
   03009 Ribosome biogenesis [BR:gvg03009]
    HMPREF0421_20940
Messenger RNA biogenesis [BR:gvg03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HMPREF0421_20940
Ribosome biogenesis [BR:gvg03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    HMPREF0421_20940
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: ADP39022
UniProt: E3DAC8
LinkDB
Position
complement(1152901..1153608)
AA seq 235 aa
MAEAKEDLTFTPEESRLIWIDCEMTGLDIFHDELCEVSVVPTDFNLKVLDDGIDLVIKPS
DAAVAHMNDFVRNMHTSSGLVDECNKNGLPLEEAQKQVVEYVKRFLPEHGKAHLAGNSVG
SDKKFLDRYMPDLMANLHYRVIDVSTLKEISRRLYPDVYRNKPAKHGGHRALADIIESID
ELRYYRDMMFVPAPGPSEAQAKAGAQHIESTSLLRDYERRGDALEDVNSAEKRDY
NT seq 708 nt   +upstreamnt  +downstreamnt
atggctgaagctaaggaagatcttacgtttacgccggaagaatcgcgcttaatttggatt
gattgcgagatgacgggactcgatattttccacgacgaattatgcgaagtatctgtagtt
ccaactgattttaatttgaaagttctagacgacggtattgatttagtgattaagccgagc
gatgctgctgtggctcatatgaacgatttcgtacgcaatatgcacacttcttctgggctt
gttgacgagtgtaataaaaacggtttgcctctagaagaagcacaaaagcaggttgttgag
tatgtaaagcgctttttgccagagcacggaaaagcacatcttgctggcaactctgttggc
tccgataaaaagttcctcgaccgttacatgccagatttaatggcaaatctgcactatcgc
gtaatagacgtaagcacgttgaaggagatttcgcgcagactttacccagacgtttaccgc
aataagccggcaaaacacggcggtcaccgtgcgctcgcggatattattgagtcgattgac
gagttgagatattaccgtgacatgatgtttgttccagctccaggcccaagcgaagcacag
gcaaaagctggcgcacagcacattgagagcacgagcttgcttcgcgactacgagcgccgc
ggagacgcgctagaagacgtaaattccgcagaaaagcgcgattattaa

DBGET integrated database retrieval system