Halotalea alkalilenta: A5892_11225
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Entry
A5892_11225 CDS
T04333
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
haa
Halotalea alkalilenta
Pathway
haa03420
Nucleotide excision repair
haa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
haa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A5892_11225
03430 Mismatch repair
A5892_11225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haa03400
]
A5892_11225
Enzymes [BR:
haa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A5892_11225
DNA repair and recombination proteins [BR:
haa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A5892_11225
MMR (mismatch excision repair)
Other MMR factors
A5892_11225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ANF59632
UniProt:
A0A172YKF2
LinkDB
All DBs
Position
2518794..2520962
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AA seq
722 aa
AA seq
DB search
MLERLSEEQRAVVAHRQGHARVAAVAGAGKTSTLAARVMALLDDGADPERMLVLMFNRAA
RDEFATRLQSLAAPGQRLPRVRTFHSIGHRLCGSLTRWGVLPARRLIEAEWQRERLARQA
MVRTLEEYPELGEEALEPERLEAFGHFCERVKGELVAPEQMVESDDFGAETRHFPTAYRM
HESLLEAQGLMTYADLLHHPLRALARDPSLRLRIQGFLDHVIVDEYQDINEAQLRLLALL
AAPHGEVMAVGDANQCIYEWRGARVDAMLERFDRCFGKPTDYPLSYTFRHGHALALLANH
AIAANRRRPDQLTLAAPGTPQTTIEARSGARALIETLEAWRDLGRPLDQAAVLVRSWTLS
VPVQLRLLRAGIPFQLGREDRFVFRLPLVRALAGYLELALQPRLLADPAHLMLLFSQPAT
FVARERLERICHRLAESQRWLAREDALLEGLKPIQRRNLKKRWSLLCELPRLAQWSPARL
LAKVIETLDAEKLLRRAAARREKGEEDVRLLDVLLEQAGELADDTAAFVALLKNPVEART
DGVVISTIHGAKGLEWPLVAVWGLNEEDCPLYGREMPLSPSGLEEERRLFYVAVTRAQER
LALFNDGGERRPSRFLAESGWEACAAVAEAMAAGADTPVAVADPALVERYLCAFGHTLPL
RQGDRPSLPAGWRPGDWIEHATFGRGEIELVEGEGERCILEVRFSTAGKRRLLAARAPIE
PG
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
ctgctcgagcggctgagcgaagagcagcgcgcggtggtcgcccaccgccagggacatgcg
cgtgtcgctgcggtggcgggggccggcaagacctcgaccctggccgccagggtcatggcg
ctgctcgacgatggtgccgaccccgagcggatgctggtattgatgttcaaccgtgcggcc
cgcgacgagttcgccacccgtctccagagcctcgccgcaccgggacagcggctgccccgg
gtgcgcactttccactcgatcgggcatcgcctttgcggctcgctgacccgctggggggtg
ctgccggcacggcggttgatcgaagcggagtggcagcgcgagcggctcgcccgccaagcg
atggtacgtaccctcgaggagtatcccgagctcggcgaggaggcgctcgaacccgagcgg
ctcgaggcgttcggtcatttctgcgagcgggtcaagggcgagctggtagcgccggagcag
atggtcgagagcgacgacttcggggccgagacgcgccatttccccaccgcctatcgaatg
catgagtcactgctcgaggcgcaggggctgatgacctacgccgatctgctgcatcacccg
ctgcgggcgctagcgcgcgatccatcgctgcgcttgcggatccagggcttcctcgaccat
gtgatcgtcgatgaataccaggacatcaacgaggcgcagctgcgcctgctggcgctgctc
gccgccccccatggcgaggtgatggcggtgggcgatgccaaccagtgcatctacgaatgg
cgcggtgccagggtcgatgcgatgctcgagcgcttcgaccgctgcttcggcaaaccgacc
gactatccgctctcctacacctttcgccacggccacgcgctggcgctgctcgccaaccat
gcgatcgccgccaatcgccgccggcccgaccaactcacgcttgccgcaccgggcacgccg
cagacgacgatcgaggcccgaagcggggcgagggcgctgatcgagacgctcgaagcgtgg
cgcgacctgggtcgtccgctcgaccaggcggcggtgctggtgcgcagctggacgctgagc
gtgccggtgcagctgcggctgctgcgtgcgggcattcccttccagctcggccgtgaggat
cgcttcgtcttccgcctgccgctggtccgtgcgctcgccggctacctcgagcttgcgctg
cagccgcggcttctcgccgatcctgcgcatctgatgttgctgttctcccagccggccacc
ttcgtcgctcgagagcgcctcgagcggatctgccatcgactggccgagtcgcagcgatgg
ctggcccgcgaggatgcgctgctggaggggctcaaaccgatccagcggcgcaacctgaaa
aagcgctggtcgcttttgtgcgaactgccgcggctggcccagtggtcgccagcccggctg
ctcgccaaggtgatcgaaaccctcgacgcggagaagctgctgcgtcgcgccgccgcgcgc
agggagaaaggcgaggaggacgtgcgcctgctcgacgtgctgctcgaacaggccggagag
ctcgccgacgataccgccgccttcgtcgcgctgttgaagaatccggtggaggcgcgtacc
gacggcgtggtgatctcgaccatccacggtgccaaggggctcgagtggccgctggtcgcg
gtgtgggggctcaatgaggaggattgcccgctctatgggcgtgaaatgccgttgagtcca
tcggggctggaagaggagcgccggctgttctacgtcgcggtcaccagggcccaggagcgc
ttggcgctgttcaacgacggcggtgagcgtcgcccgagccggttcctcgccgagagcggc
tgggaggcctgcgctgcggtcgccgaggcgatggcggcgggggcggacactccggtcgcg
gtggctgaccctgcgctggtggaacgctatctctgtgctttcggtcatacgctgccgctg
cgccagggcgatcgcccgtcgctgccggcaggctggcgacccggtgattggatcgagcac
gccaccttcggacgcggcgagatagagctggtcgaaggggagggtgagcgctgcattctg
gaggtacgcttctcgaccgccggcaagcggcgcctgctcgccgcccgcgcgccgatcgag
cctggctga
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