Halotalea alkalilenta: A5892_11350
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Entry
A5892_11350 CDS
T04333
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
haa
Halotalea alkalilenta
Pathway
haa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
haa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A5892_11350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haa03400
]
A5892_11350
DNA repair and recombination proteins [BR:
haa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
A5892_11350
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
A5892_11350
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
ClpB_D2-small
Motif
Other DBs
NCBI-ProteinID:
ANF57982
UniProt:
A0A172YFY4
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All DBs
Position
2547768..2548484
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AA seq
238 aa
AA seq
DB search
MALQPAFLLHRRPYRETSALVDLLTFEHGLVRGVARGVARPGSRSRGALQPFTPLHVAWR
GERELKTLTLIESTRAGVMLAGEGLLCALYANELLYRCLPREFAVEALFAHYGALLEALP
TPGLRAPGLRRLEITLLEALDAEPLFLSIDGDRPLEPQLRYGYDASARRFRPIADGHQGV
DGRTLRLLAHGDWEAPGLAGAAKWLLREALAPLLGARPLRSRALLQSLVERRRAMPAD
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcagcctgccttccttttgcaccgtcgcccctatcgggagaccagcgcgctg
gtcgacctgctgaccttcgagcacgggctggtgcgcggcgtcgcccgcggcgtggcgcgt
cccgggagccgctcgcgcggtgcgctgcagccgttcaccccgctgcacgtcgcctggcgc
ggagaacgcgaactgaagacgctgaccctgatcgagtccacccgcgcaggggtgatgctc
gcgggggaggggctgctttgtgcgctttatgccaatgaactgctctatcgctgcctgccg
cgtgagttcgcggtcgaggcgctgttcgcccactacggtgcgctgctcgaggcactgccg
acgcctgggctgcgtgcgcccgggctgcgtcggctcgagatcacgctgctcgaggccctt
gacgccgagccgctttttttgagcatcgatggcgatcgcccactcgagccccagctacgc
tatgggtatgatgcgtccgctcgccgtttccgcccgattgccgatggacaccagggcgtg
gatggccgcacgctgcggctgctcgcccacggagactgggaggcgccgggtctcgccggt
gcggccaagtggctgcttcgcgaagcgctggcaccgctgctcggcgcacggccgctgcgc
tcgcgcgcactgctccagtcactggtggagcggcgccgagcgatgccggcggattga
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