Halotalea alkalilenta: A5892_14390
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Entry
A5892_14390 CDS
T04333
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
haa
Halotalea alkalilenta
Pathway
haa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
haa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A5892_14390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haa03019
]
A5892_14390
03009 Ribosome biogenesis [BR:
haa03009
]
A5892_14390
Enzymes [BR:
haa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A5892_14390
Messenger RNA biogenesis [BR:
haa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A5892_14390
Ribosome biogenesis [BR:
haa03009
]
Prokaryotic type
rRNA helicases
A5892_14390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ANF59691
UniProt:
A0A172YKD7
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All DBs
Position
complement(3221546..3223249)
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AA seq
567 aa
AA seq
DB search
MQPSIQIESFSELELLPDLIKALEGLGYETPSPIQAQTIPPLLEGRDLLGQAQTGTGKTA
AFALPLLTRIDVAKRQTQVLVLAPTRELAQQVAVNFGRYGQHMAGLEVLTITGGQEYRDQ
LRGLRGGAQVVVGTPGRVIDHLERGSLHLEGLQALVLDEADEMLRMGFIDDVERVLKDTP
KSAQRVFFSATLPQEIEKIVNRYLVDPIKVQIEAKAVTTTISQRLCRVEGGAKLEALSRI
LEVEEVDAAIVFVRTRAACTSLVEQLTARGVSAAALSGDLDQSLRERTVARLKRGKVDVL
IATDVAARGLDVPRITHVINYDLPHDTEAYVHRIGRTGRAGRAGTAITFVGGREMRKIQW
LERATGQRIEQMELPDEQALRAHRDQLFIARAEAALTESDERQRALVESLVEQGHDPLEL
AIVFAQLARADEAPIHALPRGDSRRERTPRERERDGVRAPRRGREGGMSTAPREGMTRYR
VAVGHRDGVKPGQLVGALANEGGIEGTRIGRIDIRQSHSIVELPASLPATILGKMARARV
AGRPLEISEDSGRPERRRDEQEDRRVG
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
attcagcccagcattcagatcgaaagcttcagcgaactggagctgctccccgatctgatc
aaggcgctcgaaggccttggctatgaaactccctcgccgatccaggcgcagaccattccg
ccgctgctcgaaggtcgtgacctgcttggtcaggcacagaccggcaccggcaagaccgcc
gcgttcgcgctgccgctgctgacccgcatcgatgtcgccaaacgccagacccaggtgctg
gtgctcgcgccgacccgcgagctggcccagcaggtcgcagtcaacttcggccgttacggt
cagcacatggctggtctcgaagtgctcaccatcaccggtggccaggaatatcgtgaccag
ctgcgcggtctgcgcggcggtgcccaagtcgtggttggtaccccgggccgtgtgatcgat
cacctcgagcgcggctcgctgcacctcgaagggttgcaggctctggtcctcgacgaagcc
gacgagatgctgcggatgggtttcatcgacgacgtcgagcgagtgctcaaggacacgccg
aagagcgctcagcgagtgttcttctccgcgaccctgccgcaagagatcgagaagatcgtc
aaccgctacctggtcgatccgatcaaggtacagatcgaggccaaggcggtcaccaccacc
atctcccagcgtctgtgccgggtagaggggggcgccaagctcgaggcgctgtcgaggatc
ctcgaggtagaggaagtcgacgccgcgatcgtgttcgttcgtacccgcgccgcctgcacc
agcctggtcgagcagctcaccgcgcgtggcgtctctgccgctgcgctctccggtgatctc
gatcagagcctgcgcgaacgcaccgtggcgaggctcaagcgtggcaaggtcgatgtgctg
atcgctaccgacgtggccgcccgtggtctcgacgtgccgcggatcactcacgtgatcaac
tacgacctgccgcacgacaccgaagcctatgtccaccgcatcggtcgtaccggtcgcgcg
ggccgtgccggtactgcgatcaccttcgtcggcggccgcgagatgcgcaagatccagtgg
ctcgaacgtgccaccggccagcgtatcgaacagatggagctgcccgatgagcaggcactg
cgtgcccatcgcgaccaactgttcattgctcgcgccgaagctgcgctcaccgagagcgac
gaacgccagcgcgcgctggtcgaatcgctggtcgagcagggtcacgatccgctcgagctc
gccatcgtgttcgcccagctggcgcgtgccgacgaagcgccgattcacgcgctgccgcgc
ggcgactcccgtcgcgagcgtactccgcgcgagcgtgagcgtgatggtgttcgcgcacct
cgccgcggccgggaaggtggtatgtccactgctcctcgcgaagggatgacccgctaccgc
gtcgcggtcggccatcgtgatggcgtgaaacccgggcagttggtcggtgcgctggccaat
gaaggcggtatcgaaggcacccggatcgggcgtatcgacatccgccagtcgcacagcatc
gtcgaactgccggcgagcctgcctgccaccatcctcggcaagatggcccgcgcccgcgtc
gctggacgtccgctcgagatcagcgaagatagcggtcgacccgagcgtcgccgtgacgag
caggaagaccggcgcgtcggctga
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