Halomonas sp. SF2003: C8233_05770
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Entry
C8233_05770 CDS
T05423
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
haf
Halomonas sp. SF2003
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haf03019
]
C8233_05770
03009 Ribosome biogenesis [BR:
haf03009
]
C8233_05770
Messenger RNA biogenesis [BR:
haf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C8233_05770
Ribosome biogenesis [BR:
haf03009
]
Eukaryotic type
Pre-60S particles
RNases
C8233_05770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
PAD
Motif
Other DBs
NCBI-ProteinID:
AVV33249
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All DBs
Position
complement(1426108..1426680)
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AA seq
190 aa
AA seq
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MANPTAQADRLIWIDLEMTGLDPARERIIEVATLVTDGDLNLIAEGPVLAVHQPDSLLEA
MDEWNTRTHGESGLVKRVKESQIDTAEAERQTLEFLARHVAAGASPMCGNSVHQDRRFLQ
HEMPLLEEFFHYRNIDVSTLKELAKRWNPAALDGFKKRATHQAMDDIRESLAELAHYRKT
FLKLTQQGIV
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcccaccgcgcaggccgaccgcctcatctggatcgacctggaaatgaccggt
ctcgacccggcgcgtgagcgcatcatcgaggtggccacgctggtcaccgacggcgacctc
aacctgatcgccgaaggcccggtgctggccgtgcatcagccggacagcctgctggaggcg
atggatgagtggaacacgcgcacccatggtgaatccgggctggtgaagcgcgtcaaggaa
agtcagatagataccgccgaagccgaacgccagaccctcgagttcctggcccggcacgtg
gcggcaggcgcctcgccgatgtgtggcaacagcgtgcatcaggaccgccgcttcctgcag
cacgagatgccgttgctggaagaattcttccactaccgcaacatcgatgtctcgaccctg
aaagagctggccaagcgctggaatccggccgcgctcgacggcttcaagaagcgtgcgacc
caccaggcgatggacgatatccgtgagtcactggcggagcttgcgcattaccgcaagacc
ttcctcaagctgacccagcagggcatcgtctaa
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