Halomonas sp. SF2003: C8233_06925
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Entry
C8233_06925 CDS
T05423
Name
(GenBank) septal ring lytic transglycosylase RlpA
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
haf
Halomonas sp. SF2003
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
haf01011
]
C8233_06925
Enzymes [BR:
haf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
C8233_06925
Peptidoglycan biosynthesis and degradation proteins [BR:
haf01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
C8233_06925
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Motif
Other DBs
NCBI-ProteinID:
AVV33451
LinkDB
All DBs
Position
complement(1702456..1703487)
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AA seq
343 aa
AA seq
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MSWSRALPLTLALALLAGCASSGGGTQVSDGASASTGKKAGKNGRYEMDSDAYPDDAPDV
SAVPDEVPRVEPYTRSGNRSEYEVWGKTYRVMDDPRGYVAEGTASWYGKKFHGYATASGE
IYDMYTMTAAHKSLPLPTYARVTNLDNGKQVIVKVNDRGPFHEDRLIDLSYSAAWRLDML
GHGTGHVRVETLDATTWKPGPSPTQGTAESERLLARSQAVRREQGIAGLDAMQATGGSVA
SSASSASVAAKPVVASAAPSSTSSVANGEATFLQVAAVSDLSKADSIRASVSSRLGRPTR
VLGSGDLYKVQVGPLEDNVRIESLKSALADAGYAGAFSVTAER
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgagctggtcacgcgcgctaccgctgaccctcgcgcttgccctgctggccggctgtgcc
agcagtgggggtggcacccaggtcagtgatggtgcctcggcgagcaccggcaagaaggcg
ggcaagaatggccgctacgagatggacagcgatgcttatcccgatgatgcgccggatgtc
tcggcggtgcccgatgaggtgccacgtgtcgaaccctatactcgcagcggcaatcgcagc
gagtacgaggtatggggcaagacctatcgcgtgatggatgatccgcgcggttacgtggcc
gagggcactgcttcctggtatggcaagaagtttcatggctacgccaccgccagtggcgag
atctatgacatgtacaccatgacggcggcccacaagtcgctgccattgccgacctatgcg
cgtgtcaccaatctggacaacggcaagcaggtcatcgtcaaggtcaacgaccgtggcccc
ttccatgaagaccgcctgatcgacctgtcctacagcgcggcgtggcgcctggacatgctg
ggtcacggcactggacacgtgcgtgtcgagaccctcgacgccacgacctggaagccgggc
ccgagcccgacccagggcacggcagagtccgagcgtctgctggcgcgcagccaggcggta
cgccgcgagcagggcattgccgggcttgacgcgatgcaggcaaccggcggttccgtggcc
tcgagcgcttccagcgcgagcgttgccgccaagcccgtggtagcctctgctgcgccgagc
agcacgtcctccgtggcgaacggggaagctaccttcctgcaggtcgcggcggtcagtgat
ctgagcaaggccgacagcattcgtgccagtgtcagctcccgtctgggacgaccgactcgt
gtgctgggcagcggcgacctctacaaggttcaggtcggcccgctggaagacaatgtccgt
attgaatcgctcaagtcggcgctggccgatgctggctatgccggggccttcagcgtcacg
gcagagcgataa
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