KEGG   Halomonas sp. SF2003: C8233_12595
Entry
C8233_12595       CDS       T05423                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
haf  Halomonas sp. SF2003
Pathway
haf02024  Quorum sensing
haf03060  Protein export
haf03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:haf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    C8233_12595
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    C8233_12595
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    C8233_12595
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:haf02044]
    C8233_12595
Enzymes [BR:haf01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     C8233_12595
Secretion system [BR:haf02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   C8233_12595
  Eukaryotic Sec-SRP protein
   C8233_12595
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin AAA_22 cobW AAA_16 ArsA_ATPase AAA_33 AAA_31 YqeC AAA_30 ResIII APS_kinase nSTAND3 6PF2K MMR_HSR1 KTI12 AAA_14 Thymidylate_kin AAA_28 Helicase_RecD AAA_17 ParA AAA_11 ATPase AAA VirC1 AAA_19 NACHT GTP_EFTU DO-GTPase1 TsaE Arf SLFN-g3_helicase KAP_NTPase
Other DBs
NCBI-ProteinID: AVV34376
LinkDB
Position
3015323..3016759
AA seq 478 aa
MFQSLSDRLSHTLKSITGQAKLTEDNIKDTLREVRKALLEADVALPVVKAFIERVRERAV
GQEVSKSLSPGQQFVKIVQQELEAIMGEANEGLTLKGSPAVILMAGLQGAGKTTTVAKLA
RYLREREKKKVLVVSADVYRPAAIDQLETLAKEVGVDFFPSDSSQQPVAIAEAAMKHARI
QFHDVVLVDTAGRLHVDADMMDEIAALHRSVNPDETLFVVDAMTGQDAANTAKAFHEALP
LTGVVLTKADGDARGGAALSVRHITGKPIKFMGMGEKVDALEPFHPDRIASRILGMGDML
SLIEEAERTVDKSKAEQLASKVKKGEGFDLEDFRDQLQQLKNMGGMGSLMSKLPGMGQLA
EVAQSQASEKELGKLEAMINSMTPKERRNPDLINGSRKRRICMGSGTQVPDLNRLLKQHK
QMAKMMKKAGKKGGMQKMMRGMSGMMGGGGGPGGPGGMGGMGGMGGPGGMGGGRFPRR
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgtttcaaagtttgagtgatcgcctgtcgcatacgctgaagtcgattaccggccaggcc
aagctgacggaagacaacatcaaggacaccctgcgcgaagtgcgcaaggcgttgcttgaa
gccgatgtcgcgctgccggtggtcaaggccttcatcgagcgagtgcgcgaacgtgccgtc
ggtcaggaagtgtccaagagcctgtcgccgggccagcagttcgtcaagatcgtccagcag
gagctggaagcgatcatgggcgaagccaatgaaggtctgacgctcaagggcagtccggcc
gtcattctgatggcaggcctgcagggtgcgggcaagacgaccaccgtcgccaagctggca
cgctatctgcgcgagcgcgagaagaagaaggtgctggtggtctcggcggacgtctatcgt
ccggccgccatcgaccagctggaaacgctggccaaggaagtcggggtcgatttcttcccc
tccgactcctcccagcagccggtggccatcgccgaagcggcgatgaagcacgcgcgtatc
cagttccacgacgtggtgctggtcgataccgccggtcgcctgcatgtcgatgccgacatg
atggatgagatcgccgccctgcaccgcagcgtcaatcccgacgagacgctgttcgtcgtc
gatgcgatgaccggtcaggatgccgccaacaccgccaaggccttccatgaagccttgccg
ctgaccggtgtcgtgctgaccaaggccgacggtgatgcgcgtggcggtgcggccctgtcc
gtgcgtcacatcaccggcaagccgatcaagttcatgggcatgggggagaaggtcgatgcc
ctcgaacccttccacccggaccgtatcgcctcgcgcatcctcggcatgggcgacatgctg
tcgctgatcgaggaagccgagcgcaccgtcgacaagagcaaggccgagcagctggccagc
aaggtcaagaaaggcgaaggcttcgatctcgaggacttccgtgaccagctccagcagctc
aagaacatggggggcatgggcagtctgatgtccaagctgccgggcatgggtcagctggcg
gaagtcgcccagagccaggccagcgagaaggagctgggcaagctcgaggcgatgatcaac
tccatgacgcccaaggaacgccgcaaccccgatctcatcaatgggtcgcgcaagcgccgc
atctgcatgggctccggtacccaggtgccggacctcaaccgtctgctcaagcagcacaag
cagatggccaagatgatgaagaaggccggcaagaaaggtggcatgcagaagatgatgcgt
ggcatgtccggcatgatgggcggtggcggtggtcctggcggccccggcggtatgggtggc
atgggcggtatgggtggccccggcggcatgggcggcggacgcttcccgcgtcgctga

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