Halomonas sp. GFAJ-1: BB497_13960
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Entry
BB497_13960 CDS
T05375
Name
(GenBank) nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
hag
Halomonas sp. GFAJ-1
Pathway
hag02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hag00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BB497_13960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hag02000
]
BB497_13960
Transporters [BR:
hag02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
BB497_13960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AVI63735
UniProt:
H0IZ19
LinkDB
All DBs
Position
3097012..3098583
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AA seq
523 aa
AA seq
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MTLKKTLLASIIGAAVAGTAMLPMAASAETLRIGYSADPETLDLHEQLSGGVLRFSHLAF
DPLVRWTKDFQFEARLATEWEQVDDTHMRMTLREGVTFHSGNEFTAKDVVWTIERLKESP
DYRAIFEPIASVEAIDDYTVEITTTEPYPLLLNLATYIFPMDSEFYTGETDDGNDKSEIV
KAGNSFASRNVSGTGPFIVTDRRQGVRVDFERFEDYWDTETEGNVSRIVLTPIAENASRV
AALLSGGVDFIDAVPPNDLDRVRDAQGANLYEIPGTRIIGFQLNEERVEAFQDARVRQAV
DLAINQEGIADRLMRGFATPAGQFSPEGYSGHNPDLVPRYDLERAQELMAEAGYEDGFSV
EMIAPNNRYVNDAQIAQAVANMLARINIDVSLRTMPLAQYWPEYDTRQSDMAMIGWHSDT
EDSANFFQYLSFCIDEETGAGQYNYGSYCNEEIDALVTQADSETNLEKRNEMLREAEAML
YEDVGYVMLHWQNLAYAAADGINIEPVVNATDFPYLGDLVIDR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgacgctcaaaaaaacgctactagcctccattattggcgccgctgttgcgggcactgca
atgctaccgatggcggcaagcgctgaaacactgcgtattggctactctgctgaccctgaa
actctcgacctccatgagcagctttcgggcggcgtattacgcttttcacacttagccttt
gacccgctggttcgctggaccaaagactttcaatttgaagcgcggctggccactgagtgg
gagcaagtagacgacacccatatgcgcatgacgctgcgtgaaggcgttaccttccactcc
ggcaacgaattcactgccaaagacgtggtatggaccattgagcgtttaaaagagagccca
gactatcgcgctatttttgagccgatagccagcgttgaagcgattgatgactacaccgta
gaaatcaccactactgagccctacccgctgctgctcaaccttgctacctacattttcccc
atggatagcgagttttacaccggcgaaaccgacgacggaaacgacaaatcagaaatcgtt
aaagcgggcaactcctttgcatcgcgcaacgtctccggtaccggcccgttcatcgtcacc
gaccgccgccagggtgtacgggttgattttgagcgtttcgaagattactgggataccgaa
actgaaggcaatgtttcacgcatcgtactgacgcccattgctgaaaacgcctcccgcgtt
gcggcgcttctctctggcggcgttgattttattgatgccgtaccgcctaacgatttagac
cgtgttcgcgatgcccaaggtgcaaacctttatgaaattcccggcacgcgcatcatcggc
ttccagctgaatgaagagcgggttgaagccttccaggacgctcgcgtccgccaagcggtt
gaccttgccatcaaccaagagggcattgccgaccgcttaatgcgcggtttcgcaacgccc
gcaggccagttctctcctgaaggctattcgggccacaatcctgacctggttccgcgttac
gatctggagcgggcccaggaactaatggcggaagcaggctatgaagacggctttagcgtg
gaaatgattgcgccgaacaaccgctacgttaacgatgcgcaaatcgcccaggcggttgct
aacatgttggcgcgtatcaacattgatgtcagcttacgcacaatgccattagcccaatat
tggccggaatacgacacccgtcaatcagacatggccatgattggctggcactctgatacc
gaagacagcgctaacttcttccagtatctctccttctgtattgatgaagagacgggtgcg
ggccagtacaactacggcagctactgcaacgaagagattgatgcgctagttacacaagcg
gacagcgaaaccaatcttgaaaaacgtaacgaaatgctacgtgaagctgaagccatgctt
tatgaagatgttggctacgtcatgcttcactggcagaaccttgcgtatgccgccgccgat
ggtatcaacattgagccggtcgttaacgccaccgacttcccctacctgggtgatttggtc
atcgaccgctaa
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