Hahella sp. KA22: ENC22_20795
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Entry
ENC22_20795 CDS
T05793
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
hahe
Hahella sp. KA22
Pathway
hahe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hahe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ENC22_20795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hahe03400
]
ENC22_20795
Enzymes [BR:
hahe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ENC22_20795
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ENC22_20795
DNA repair and recombination proteins [BR:
hahe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ENC22_20795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
zf_CopZ
Ribosomal_S13
zf-TFIIB
RNHCP
Prim_Zn_Ribbon
Lar_restr_allev
TF_Zn_Ribbon
Cys_rich_KTR
Auto_anti-p27
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
AZZ93503
UniProt:
A0A3T0VQJ9
LinkDB
All DBs
Position
4725462..4726370
Genome browser
AA seq
302 aa
AA seq
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MPEYPDITVYIDALERRVLGRVLESVELHSYFLLRTAEPPLEAVVGARVTQLRRIGKRIA
IGFDNDVWMVFHLMIVGRLHWRDAGKKAPGKNALISLQFPNGVLFLTEAGTKKRASLHLV
GEETGLAQINPGGLEILESDLHAFQQALTHNNHTLKRALTDPHIFSGVGSAYSDEILHAA
RLSPIAHTQKLSPEEIERLYQACRTSLTTWTQRLRDQYGDAFPEKVTAFREDMAVHGRYN
LPCPVCGGAVQRIRYATNETNYCPNCQTEGRLLADRALSRLLKKDWPRSVEDLEKIRGKN
DH
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaatatcctgacattactgtgtatatcgatgcgttggagcggcgggttcttggg
cgggtgttggagtcggtggagttgcatagttattttctgttgcggacggcggagccgcct
ttggaggcggtagttggcgcgcgagtgacgcagttgcggcggattggtaagcgtatcgcc
attggctttgataatgatgtttggatggtgtttcacctgatgatcgtggggcggttgcat
tggcgcgacgcgggtaagaaagcgccggggaaaaatgcgttgattagcttgcagttccct
aatggcgttctgtttttgacggaagcgggaacgaagaagcgcgcttcgctgcatcttgtc
ggagaggaaacaggattagcgcagatcaatccgggcggtctggagatattggagtccgac
ctccacgcgtttcaacaggcattgacccacaataaccacaccttaaaaagagcgctcacc
gatccgcatattttcagcggcgtcggcagcgcctattccgatgaaattctgcatgcggcc
cgactttctcccattgcgcacactcaaaagctgagtccagaagaaattgagcggctgtat
caggcgtgccgcactagtttgaccacttggacgcagcgtttgcgcgaccagtatggcgac
gcctttccagaaaaagtcaccgcctttcgcgaagacatggcggtgcatggtcgttacaac
cttccctgcccggtctgtggcggcgccgtacagcgcattcgctatgcgaccaacgagacc
aactattgccccaattgccagacggaaggacgcttactcgcggatcgggcgttgtcccgt
ctgttgaaaaaagactggccaagaagcgttgaggacctggagaaaattcgcggcaaaaac
gatcactga
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