Halobacterium salinarum NRC-1: VNG_1359G
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Entry
VNG_1359G CDS
T00038
Gene name
rad2
Definition
(GenBank) DNA repair protein
KO
K04799
flap endonuclease-1 [EC:3.-.-.-]
Organism
hal
Halobacterium salinarum NRC-1
Pathway
hal03030
DNA replication
hal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VNG_1359G (rad2)
03410 Base excision repair
VNG_1359G (rad2)
03450 Non-homologous end-joining
VNG_1359G (rad2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hal03032
]
VNG_1359G (rad2)
03400 DNA repair and recombination proteins [BR:
hal03400
]
VNG_1359G (rad2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hal04147
]
VNG_1359G (rad2)
Enzymes [BR:
hal01000
]
3. Hydrolases
3.-
3.-.-
3.-.-.-
VNG_1359G (rad2)
DNA replication proteins [BR:
hal03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
VNG_1359G (rad2)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
VNG_1359G (rad2)
DNA repair and recombination proteins [BR:
hal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
VNG_1359G (rad2)
Exosome [BR:
hal04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
VNG_1359G (rad2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
GreA_GreB_N
Motif
Other DBs
NCBI-ProteinID:
AAG19690
UniProt:
Q9HQ27
LinkDB
All DBs
Position
complement(1013308..1014291)
Genome map
AA seq
327 aa
AA seq
DB search
MGNADLRQLAAIEETPFADLEGSVVAVDAHNWLYKYLTTTVQWTGADVYTTSDGTEVANL
VGAVQGLPKFFEHGLTPVFVWDGGVTELKDDEIADRREQRERYEEQLDDAREAGDAAEAA
RLDARTQRLTPTIHETTRELFDLLDIPQVEAPAEGEAQAAYMTRTDDAVDYAGSDDYDCL
LLGSPVTLRQLTSSGHPELMDFDATLAEHDLTWEQLVDVGILCGTDFNPGIDGFGPTTAL
DAIGEHGDLWDVLAAEGEHVAHGDRIRELFLNPDVTDDYVIDPDVSPAIDAARAFVTDEW
EVDADAVARGFERIDAAAAQTGLDRWT
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggggaacgcggacctccggcagctcgcggccatcgaggagactcccttcgcggacctc
gaagggagtgtggtggccgtcgacgcccacaactggctgtacaagtacctcaccacgacc
gtccagtggaccggcgcggacgtctacaccaccagcgacggcaccgaagtggcgaacctc
gtcggcgcggtgcagggcctgccgaagttcttcgaacacggcctcacgcccgtgttcgtc
tgggacggcggggtcaccgagctcaaagacgacgagatcgccgaccgccgcgagcaacgc
gagcgctacgaggaacagctcgacgacgcccgcgaggcgggcgacgccgccgaggcggcg
cgcctggacgcgcgcacgcagcgactcacgcccaccatccacgagaccacccgggagctg
ttcgacctgttggacatcccgcaagtcgaagcccccgcggagggcgaagcacaggccgca
tacatgacgcggacggacgacgccgtcgactacgcgggcagcgacgactacgactgcctg
ctgcttgggtcgccggtgacgctgcgccagctcacgagctccggccacccggagctgatg
gacttcgacgcgacgctcgccgaacacgacctgacgtgggagcaactcgtcgacgtcgga
atcctctgtgggacggatttcaaccccgggatcgacgggttcggaccgacaacggccctg
gacgcgatcggcgagcacggcgacctctgggacgtgctggcggccgaaggcgagcacgtc
gcccacggcgaccgcatccgggagctgttcttgaaccccgacgtgaccgacgactacgtg
atcgaccccgacgtgtcgccggccatcgacgcggcccgcgcgttcgtcaccgacgagtgg
gaggtcgacgccgacgcggtcgcccgggggttcgagcgcatcgacgccgcggccgcacag
accggcctcgaccggtggacgtga
DBGET
integrated database retrieval system