KEGG   Halobacterium salinarum NRC-1: VNG_2417G
Entry
VNG_2417G         CDS       T00038                                 

Gene name
polA1
Definition
(GenBank) DNA polymerase type II small chain
  KO
K02323  DNA polymerase II small subunit [EC:2.7.7.7]
Organism
hal  Halobacterium salinarum NRC-1
Pathway
hal03030  DNA replication
Brite
KEGG Orthology (KO) [BR:hal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    VNG_2417G (polA1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hal03032]
    VNG_2417G (polA1)
Enzymes [BR:hal01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     VNG_2417G (polA1)
DNA replication proteins [BR:hal03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    D-family DNA polymerases
     VNG_2417G (polA1)
SSDB
Motif
Pfam: DNA_pol_E_B Metallophos Metallophos_2 tRNA_anti-codon DUF2914
Other DBs
NCBI-ProteinID: AAG20504
UniProt: Q9HMR7
LinkDB
Position
1811590..1812768
AA seq 392 aa
MTGASTGTGEYQDFVSVFRDRYDRLAAQLRGRVNHRPTSALASMPGGSDAAIVGMVNDIR
STTSGHWRVELEDTNGVFPVLVLKDRDVSDLVDDLLLDEVIAVSGTLADDGTILFADDIY
FPEVPRTYSPSTADRSVQAALISDVHVGSQEFAADAWRSFADWLHTPAAESVEYLLIAGD
MVEGVGVYPGQDEELDIVDIYDQYETFAEHLKDVPGDMEIVMIPGNHDAVRLAEPQPAFD
EELRSIMRAHDARITSNPSTVTIDGVSVLLYHGVSLDEVIAEHPSDDVTYDDPQNAMELL
LKKRHVAPPFGGRTRLAPEAEDHLAIDTVPDVFHTGHVHKLGVGIHHNVRLVNSGCWQHQ
TAFQESVNISPDVATAPILDLDTLDITVHKFS
NT seq 1179 nt   +upstreamnt  +downstreamnt
atgacgggcgcgtccacgggaaccggcgagtaccaggacttcgtgtcggtgttccgcgac
cggtacgaccgcctcgccgcacagcttcggggtcgcgtcaaccaccggccgaccagcgcg
ctcgcctcgatgcccgggggcagtgacgccgccatcgtcggcatggtcaacgacatccgg
tcgaccaccagcggccattggcgcgtcgagttggaggacaccaacggcgtcttcccggtg
ctcgtgttgaaagaccgcgacgtctcggatctcgtcgacgacctcctgttggacgaggtg
atcgccgtgtcgggcacgctggctgacgacggcaccatcctcttcgccgacgacatctac
ttcccggaggttccccgcacgtactcgccgagcaccgccgaccgcagcgtgcaggccgcg
ctcatctccgacgtgcacgtcggcagccaggagttcgccgccgacgcctggcggtcgttc
gccgactggctgcacacgcccgccgccgagtccgtggagtacctgctcatcgccggcgac
atggttgagggcgtcggcgtctacccgggacaagacgaggaactcgacatcgtcgacatc
tacgaccagtacgagacgttcgccgaacacctcaaagacgtgcccggggacatggagatc
gtgatgattccgggcaaccacgacgccgtccggctcgccgaaccgcagccggcgttcgac
gaggagctgcggtcgatcatgcgcgcccacgacgcccgcatcaccagcaacccgtcgacg
gtcaccatcgacggcgtctcggtgctgttgtaccacggagtgtccctggacgaggtgatc
gccgaacaccccagcgacgacgtcacctacgacgacccccagaacgcgatggagctcctc
ctgaaaaagcgccacgtcgccccgccgttcggcggccgcacccggctcgcgcccgaggcc
gaggaccacctcgccatcgacaccgttccggacgtgttccacactggacacgtccacaag
ctcggcgtcggcatccaccacaacgtccggctggtcaactccgggtgctggcaacaccag
acggcgttccaggagtcggtgaacatctcgccggacgtcgccaccgcccccatcctggat
ctggacaccctcgacatcacggtgcacaagttctcgtag

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