Halobacterium salinarum NRC-1: tbpC
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Entry
tbpC CDS
T00038
Symbol
tbpC
Name
(GenBank) TbpC
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
hal
Halobacterium salinarum NRC-1
Pathway
hal03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
tbpC (tbpC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hal03000
]
tbpC (tbpC)
03021 Transcription machinery [BR:
hal03021
]
tbpC (tbpC)
Transcription factors [BR:
hal03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
tbpC (tbpC)
Transcription machinery [BR:
hal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
tbpC (tbpC)
RNA polymerase III system
TFIIIB
tbpC (tbpC)
RNA polymerase I system
SL1/TIF-1B
tbpC (tbpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-ProteinID:
AAC82884
UniProt:
O52004
LinkDB
All DBs
Position
pNRC100:111987..112532
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AA seq
181 aa
AA seq
DB search
MTVEIANIVGSGDLGVELDVEPLEADLSTPYSEYDPSNYHGLYVRLEENGPLITVYRSGK
YIITGCASMESLHETNEEFLGMLADLGVTEEDTQTGFTVENVVCTAMLDELVSLNALAIG
LGLEVTEYEPEQFPGLVYRPEEIGAVLLVFANGKMVITGAKDTETAESAYEYFQSKVQEL
V
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcgagattgcgaacatcgttggctccggcgatcttggagtggagctggatgtt
gagcccttggaagctgacttgtccacgccgtattcagagtacgatccatcgaactaccac
ggcctctacgttcgtctcgaagaaaacggaccactcatcacggtatatcggagcgggaag
tacatcatcaccgggtgcgccagtatggagtcgctgcacgagacgaatgaggagttcttg
gggatgcttgcggatctaggtgtgaccgaggaagacacgcagaccgggttcaccgtcgag
aacgtcgtttgtacggcgatgcttgacgagctagtttctctgaatgccctcgcaatcgga
ctaggattggaagtgacggagtacgagcctgagcagttcccaggacttgtctaccgaccc
gaggagatcggtgccgtgttgctagtattcgctaacgggaagatggttatcacgggagcc
aaagacaccgaaacggctgaatcagcgtatgagtactttcagtcgaaagtccaagaatta
gtttaa
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