Halorhabdus sp. CBA1104: Hrd1104_11855
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Entry
Hrd1104_11855 CDS
T06289
Name
(GenBank) ATP-dependent helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
hala
Halorhabdus sp. CBA1104
Brite
KEGG Orthology (KO) [BR:
hala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hala03400
]
Hrd1104_11855
Enzymes [BR:
hala01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Hrd1104_11855
DNA repair and recombination proteins [BR:
hala03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Hrd1104_11855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Viral_helicase1
AAA_11
GBP_repeat
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QGN07918
UniProt:
A0A650A7I0
LinkDB
All DBs
Position
complement(2350079..2352973)
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AA seq
964 aa
AA seq
DB search
MTEPSPNDRQKDLIEGTEGLYLVDAGPGTGKTFAITRRYGTIVDQPDVEPEDILLMTFTR
SAAAEMKERIVDHSSYGLRELADAPIQTFHSHCHDILREHGYAAPTHLGLDERITGSTQI
IDDELIEAERFREFFSGFRDDYPEYTEFYRVLSEQDELLELIKELASKGIFPTVDGWYRD
GESHLDGDFEAFKERFDAVNQPRNDGRKQSELRDDLSRFGRNKTYLSDAPSKSELRGGRG
TKQLDDDVASDVFYEEREDLKAFVHDVYIEYLQFALGRNSLNFGFLQLFAFVLLCEDQRV
RQTAQFEYVMVDEFQDTSEIQFKLALLLSGTDNFCAVGDWKQSIYSFQYADVQNILDFED
RLERFTADLNSDADRIDFDTGDLTRIELQENYRSTESIIDLSEQAIVTPASSGEDVDTTL
DDVVELSSNAAFDNTVIEGIQHGDEHEAVLSTVQDIVGNDDYAVEDEDGNPRPPEYRDIA
VFTRTRDYGRELLDVADEYDFPMAYDGGIELFRTDPAKLLLAWLRILESDADRGWGVVLE
RIGYTFDEIEHMLETEAYPPDPVAFRDELRGLESVGAVARRVLDRYGFTGDTGDVLLHTT
QSVYDSTTVTRGELIQFIERGIENGSTVDVRANAGDNAVTVQTIHTAKGLEYPIVILANM
NEGSFPPRAGGSSVIQYQDPVGLRQRKLYSEERVYPHIYDNWRHDVLRRCLPQEYDEERR
LLYVAVTRAENHVVFAAGEEPNTFIEELPVAVEEIDVTVEGLDRDGSADAELPFAVTTPD
GPIGHTPHSLMDETVFEEIGERMESSPETEPETRGVDFGSRVHDFAEAYALEDDVTPSNP
HEQRVVEFVDDLPGELHVEEPVTLPIEVEDQRITISGIVDLVHVTADRVDIIDYKTDSTR
HAQPEYRKQLSVYYHVLSEWFAEKDVTTSLFYTTDGIREQIEPLSLEELQSIVREGGMQS
MSGN
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgactgagccgtcaccgaacgatagacaaaaggatctcatcgagggtacagaggggttg
tacctagtcgatgccggtcctggaacgggcaagacgttcgccattacccgtcgatacggg
acgatcgttgaccagcccgatgtcgaacccgaagacatcctactgatgaccttcacgcgg
agcgccgcagcagagatgaaagaacggatcgtcgaccacagttcgtatgggctgcgagaa
ctggccgacgccccgatccagacgttccattcccattgccacgatatccttagagaacac
ggctacgctgctccgacacatctcggtctggacgaacggataaccggctcgacgcagatt
atcgacgatgagctgatcgaagctgaacgattccgggagttcttcagcggattccgcgac
gattatccggaatacacggagttctaccgggtactctcagagcaggacgagctactcgaa
ctgatcaaggaactcgcgtcgaaaggtatcttcccgactgtcgacgggtggtatcgagac
ggcgagtcgcatctcgacggggacttcgaggcgttcaaggagcggttcgacgcagtcaac
cagccccggaacgacggtcggaagcagtcagagctacgcgacgacttgagccgcttcgga
cggaacaagacctatctttcggacgcgccatcgaagtccgaattacggggcggccgcggt
acgaaacagctagacgatgatgtggcgagtgacgtcttctacgaagagcgtgaggatctc
aaagcgttcgttcacgacgtctacatcgagtatctccaattcgcattgggtcgcaactct
ctcaacttcggattcctccagttgttcgcgttcgtgctgctctgtgaggatcagcgcgtc
cgacagacggcacagttcgagtacgtcatggttgacgagttccaggacaccagcgagata
cagttcaaactcgcgctgctgctgtccgggacggacaacttctgtgcagtcggggactgg
aaacagagtatctactccttccagtacgcggacgttcagaacattctcgacttcgaggac
cggctggaacgattcacggcagacctcaacagcgatgccgaccggattgatttcgacacg
ggtgatctaactcggatcgaactccaggagaattatcggtcgacggagtcgatcatcgac
ctctccgagcaggccatcgtaacgccggcctcaagcggtgaggatgtcgataccactctc
gacgatgtcgtcgaactgtcctcgaacgctgctttcgacaacacggtcatcgagggcatc
cagcatggggacgaacacgaggccgtactctcgacggttcaggatatcgtcggcaatgac
gactacgccgttgaggacgaggacggcaatccgcgcccaccggaataccgtgatatcgcc
gtgttcactcggacacgggattacggtcgggaactgcttgacgtcgctgacgagtacgat
ttcccgatggcctacgatggcggaatcgaacttttccggaccgatccggccaaactgttg
ctcgcgtggctccgaattctcgagtcggatgccgaccgcggctggggggtcgttctcgaa
cggattgggtatacgttcgacgagatcgagcatatgctggagacagaggcgtatccgccg
gatccggttgcgttccgtgatgagcttcgtggattggagtcagtcggcgcagttgcacgt
cgagtccttgatcgctacggattcacgggcgatacgggagatgtccttctccacacgacc
cagtcagtctacgattcgacgacggtcactcgcggtgagttgatccagttcatcgagcgt
ggcatcgagaacgggagtacggttgacgtccgcgcaaacgcgggcgataacgcggtgacc
gtccagacgattcacacggccaaggggctcgaatatccgatcgtcattctggcgaacatg
aacgagggaagtttcccgccacgcgctggtggttcaagcgtcatccagtatcaagacccg
gttggcctccgacagcgaaaactctactcagaggaacgtgtctatcctcacatctacgac
aactggcggcatgacgtccttcgacggtgtctgcctcaagagtatgacgaggaacgccgg
ttactctatgtcgcggttacgcgcgcggagaatcacgtcgtattcgcggctggagaggag
ccaaacacgttcatcgaagagctgccagtcgctgtcgaagaaatcgatgtgactgtcgaa
ggacttgatcgcgacgggagcgctgatgcggagctaccgttcgcagtaaccacgccggat
ggaccgatcggtcatacgccgcattcgctaatggacgagacagtcttcgaagagatcggt
gagcggatggaatccagtcccgagactgaaccagagactcgaggagtggacttcgggtca
cgagtccacgatttcgccgaggcatacgcactggaggatgacgtcacgccgtcgaatccc
cacgagcaacgggtcgttgagttcgtcgacgacctgccgggcgagttgcacgttgaagaa
ccggttacgctcccgattgaggtcgaagaccagcggataactatctctggaatcgtcgat
cttgttcacgtcaccgctgatcgggttgacatcatcgactacaagacggacagtacgcga
cacgcacagccggagtatcgaaagcaactcagtgtatactatcacgtcctctctgagtgg
ttcgccgagaaagacgtcacgacgagtctgttctatacaactgatggaatacgggaacag
attgaaccgctctcacttgaggagttgcagtcgattgttcgcgaaggcggtatgcaatcc
atgtctggcaactaa
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