Haloferax alexandrinus: G3A49_13565
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Entry
G3A49_13565 CDS
T06450
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
hale
Haloferax alexandrinus
Brite
KEGG Orthology (KO) [BR:
hale00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hale03400
]
G3A49_13565
Enzymes [BR:
hale01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G3A49_13565
DNA repair and recombination proteins [BR:
hale03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
G3A49_13565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
DEAD
DUF2800
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QIB79097
UniProt:
A0A6C0UV91
LinkDB
All DBs
Position
2737541..2741176
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AA seq
1211 aa
AA seq
DB search
MTEGPEEIQLTDEQEDALVQGRNVAITAGAGTGKTTALTERYVTILADNPSLTPENIVTI
TFTRKAAAELTERVREEVYDRLNAVNSPEAYNRWRNVLDDLEDGYVHTIHAFCTRVLRER
AVEAPVPLGFDVLDEDGAATLQREVVTEFLERNQDDDDVALLAQLWGRDQLVDVLAGLLD
ERPQSESVLKAWRDADVDDYVDICWEVVCDLDVADARQTLYADGLVEQLRTVANRVDRED
TIADEDGLRAYQTFTEVATTLSDDPEESDPRDCQRAILKLYEACEKKNGGLYSSSGYVVG
DRDEWGEYGDVYDDLKDAIDTVIDAVEPHADAVETTPGGLEENSAHYALALMRVFDDVLA
TYTDEKDRRDTLDFPDVIETTLEFLRANDAVTERLREQFAAVMVDEFQDTDPRQWELIKL
LTGVDEQAASNVFLVGDEKQSIYGFRGADVTTFGDARRELQTVNEARGVDDVPDSDAASP
TALELSGNFRTLDEPLSFLNELFEYLFQPEGDSHEPHEAPPQELTTQRDRIEDIEGLTGS
VEYLAVPDDADTAAELFGDDHPVAEGALDHTIEAEAQALAARLTHLFDDPPTVQDPDTGA
HRDATPDDTAILLRRRTHLDRYQRALEEYDIPYTVVGGVGFYDTPEVQALTNLLRVLGDP
QDDVSLYGVLRSPLFGFADDRLAPAVAEADSVWDALAEADDPQLADAFDLLTTWRTLSGC
ATPSEDGVLPWHRLLSRVIDDTGYLASVSADERGRQAVANVEKFRDQVRTWSENGVHTAA
GLLHRIDRQAEIDPREGEADIPGDAEGVRVMTIHSAKGLEFPIVAVPDLGSDLNFGRSVD
DHGYVRLVDGTDDAPPVPAVGGPNPGDAFSIEKTAVHEYADRQFRPKERAESKRLLYVAC
TRTRDHLLLCGTHDIDVDESGAIELGEPAAFDDADRWRDWLQPALLDGALIVEAIRDGQA
RGEIDGASYTVRRPPRPVDWYTDDDAVDSAPEISIPSPPSLSPAKRIAATTLVNAVADAS
TDGHSYSQREGSAGLSPTTFGTVVHRINELRPPRAEWPTLIHRLSRMTGEEPTEADLREA
VNHAADAVEFVDHIESDAQLQEVHDEYSVVARIDESRIVGDIDRLLVTPDTFHIIDYKTN
DLSATTPDELAEHYRPQMLAYALALLQHDRTRDVRASFRFTDEGIEERFHWVSDQMTEIE
SELRSMVDLVD
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgactgagggccccgaggagattcagctcacagatgaacaggaggacgcgctcgtccag
ggccggaacgtcgcgatcactgccggcgccgggacggggaagacgaccgcgctcaccgag
cggtacgtgacgatactggccgacaacccgtcgctcacgccggagaacatcgtcacaatt
accttcacgcgaaaggctgctgccgaactgaccgagcgcgttcgagaggaggtgtacgac
cggctcaatgctgtcaactctccagaggcctacaaccgctggcgaaacgtccttgacgac
ctggaggacggctacgtccacaccattcacgcgttctgtacccgggtcttgcgagaacga
gccgttgaggctccggtgccactcggcttcgatgttctcgacgaagacggtgcagcgaca
ctccagcgcgaagtcgtgacggagttccttgaacgtaatcaggacgatgacgatgttgcg
ctccttgcccagctctggggtcgcgaccagttggtcgatgtactcgctggattactcgac
gagcgcccccagagcgagtctgtcctcaaggcgtggcgtgacgccgatgtcgacgactac
gtcgatatctgctgggaggtcgtctgcgatctcgacgttgccgacgctcggcagacgttg
tatgcggacggactcgttgagcagctacgaacggtcgcgaaccgcgtggaccgtgaggac
actatcgccgacgaggacggccttcgagcctaccagaccttcaccgaggtcgcgacgaca
ctctcggacgatccggaggaaagtgatcctcgcgactgtcagcgggcaatcctcaagctc
tacgaggcctgtgagaagaagaacggcggcctgtacagcagttcggggtacgtcgtcggt
gaccgggacgagtggggtgagtacggtgacgtctacgacgacctgaaagacgccatcgac
acggtcatcgatgccgtcgaaccgcacgcggatgcggtcgagacgacgccggggggactg
gaagagaatagcgctcactacgcgctggctctgatgcgggttttcgacgacgtcctcgca
acctacaccgacgagaaggaccgccgggatactctcgactttcccgacgtgatcgagacg
acccttgagttcctgcgagccaacgatgccgtcacggagcggcttcgagagcagtttgcg
gccgtgatggtcgacgagttccaggacacggacccgcgccagtgggagttaatcaagctc
ctcacgggcgttgacgagcaggcggcgtcgaacgtcttcctggtcggcgacgagaaacag
agcatctacggattccgtggggccgacgtgacgacgttcggggatgcgcgcagagaactc
cagaccgtcaacgaggcccgtggggttgacgacgttcccgacagcgatgccgcgagtccg
accgcgctcgaactctccgggaacttccggacgctggacgagccgctgtcgttcctgaac
gagctcttcgagtacctattccagccggagggtgacagccacgaaccccacgaagcgcca
ccgcaggagttgaccacacaacgcgaccgtatcgaggacatcgagggactgaccgggagt
gtcgagtatctcgctgtccccgacgacgccgatacggcagcggagctcttcggcgacgac
catccggttgccgaaggcgcgctcgaccacactatcgaggccgaggcgcaagcgctcgct
gctcgactgacccacctgttcgacgatccgccgacagtccaagaccccgatacaggtgcc
catcgtgacgctacgccggacgacacggctatcctcctgcgccggcgaacgcatctcgac
cggtatcagcgcgccctcgaggagtacgacatcccctacactgtcgtcggtggcgtcggg
ttctacgatacgcccgaagtccaggcgctcacgaacctgcttcgagttctcggtgatcca
caggacgatgtctccctctacggggtgcttcggtcgccgctgttcggattcgcggatgat
cgcctcgcaccggcggtcgcagaagccgattcagtgtgggatgcgctcgccgaggcggac
gatccacagctcgcggacgcgttcgacctccttacgacgtggcggaccctcagcggctgt
gcgacgccgtccgaagatggcgtcctcccgtggcaccgcttgctgtcccgggtgatcgac
gacacggggtatctggcgagtgtaagtgctgacgaacgcggtcgacaggccgtcgcgaat
gtcgagaagttccgcgaccaggttcgtacctggagcgagaacggtgttcacacagctgcc
gggttgctccaccggatcgaccgccaagccgagatcgaccctcgtgagggggaggcagat
atcccgggtgacgccgagggcgtccgggttatgacgatccattccgcgaagggactcgag
ttcccgatcgtcgccgtccccgatctcgggagtgatctcaacttcggccgctccgtcgac
gaccatggctacgttcgactcgtggacggaactgatgacgcgccgccggtcccggcggtc
ggcgggccgaatccgggcgatgcgttctccatcgagaagaccgccgttcacgagtacgct
gaccgacagttccgtccaaaggagagggcggagtcgaaacggctcctctacgtcgcgtgt
acacgaacgcgggaccacctccttctctgcggcacgcacgacatcgacgttgacgagtcc
ggtgcaatcgaacttggggagcctgctgccttcgacgatgcagaccggtggcgcgactgg
ttacagccagccctcctcgatggagcactcatcgtcgaggcgattcgggatggacaggcc
cgtggcgagatagatggagccagctatactgttcgcaggccgccgcgcccagtagactgg
tacaccgacgacgacgctgttgattcagcgccggagatctcgattccttcaccgccgtcg
ttatcgccggcgaaacggatcgcggctacgaccctcgtgaatgcggtggcggatgcgtct
acggacggtcatagttactctcaacgtgaggggtcggcgggtctgagccctacgacgttc
gggacggtcgtccaccgaatcaacgaactccgaccgccgagagccgagtggcccaccctg
atccaccgtttgagtcggatgaccggtgaggagccgacagaagcagacctccgtgaagct
gtcaaccatgctgctgatgcagtcgaatttgtggaccacatcgagtccgatgcccagctt
caggaggttcacgacgagtactctgttgtcgctcgaatcgatgagtcgcggattgtcggt
gatatcgaccggctgctcgtcaccccggatacattccacattatcgactacaagaccaac
gacctctcggctacgacaccggatgagctcgcggaacactatcgaccgcagatgctcgcg
tacgctctcgcactcctccaacatgaccggactcgtgacgtacgagcttcattccggttt
actgacgaggggatagaggagcggttccattgggtgtcggatcagatgactgagattgaa
tctgaactacggtcaatggtggatttggtagattaa
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