KEGG   Halorientalis sp. IM1011: BV210_00495Help
Entry
BV210_00495       CDS       T04693                                 

Definition
(GenBank) DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
hali  Halorientalis sp. IM1011
Pathway
hali03030  DNA replication
hali03410  Base excision repair
hali03420  Nucleotide excision repair
hali03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hali00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BV210_00495
   03410 Base excision repair
    BV210_00495
   03420 Nucleotide excision repair
    BV210_00495
   03430 Mismatch repair
    BV210_00495
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hali03032]
    BV210_00495
   03400 DNA repair and recombination proteins [BR:hali03400]
    BV210_00495
Enzymes [BR:hali01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BV210_00495
    6.5.1.6  DNA ligase (ATP or NAD+)
     BV210_00495
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     BV210_00495
DNA replication proteins [BR:hali03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    BV210_00495
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     BV210_00495
DNA repair and recombination proteins [BR:hali03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     BV210_00495
   NER (nucleotide excision repair)
    Other NER factors
     BV210_00495
   MMR (mismatch exicision repair)
    Other MMR factors
     BV210_00495
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Motif
Other DBs
NCBI-ProteinID: AQL41281
UniProt: A0A1Q1FEN0
LinkDB All DBs
Position
96158..97813
Genome map
AA seq 551 aa AA seqDB search
MEFAAFAERADEIEATSADLEIVSLVRDLFSVADDDLDTVARFVQGRVFPAHESTTLDIG
PNLCYEAIARAAGHNVSADDVESRVAAVGDVGDVAAEYDFGGQQGLSAFGGTDDSAGLTV
GEVESELQDLAAATGSGSQDRKLDRLFGLFNRCDPDEARYLARIVLSEMRIGVGEGTVRD
ATTEAFDVPVEAVERALQVTNDYGLVATVAREDGPSGLDDLHLEIGRPVQAMLAQAGTVT
DAVESWGSVAVETKYDGARVQVHYDGDSVSLFSRNMEDVTDPLPEVVDFVEDSLTAPAIL
DGEVVAVDDDGDPLPFQEILRRFRRKHDVAKAQEEVEVELWAFDCLHADGEDLLDAPLAD
RHARLDTLLDSRVSTLAVTDDPDEIADIEADALDAGHEGIMLKDPDSPYSPGRRGKEWLK
RKPDVETLDLVVTGAEWGEGRRAEFLGTFELSVRAGPDEFETIGKVATGITDEELAELTD
LLEPKVRAEDGKTVEIDPSVVFEVGYEEIQTSPTYSSGYALRFPRYLGVREDKNPENADT
LKRVERLADGE
NT seq 1656 nt NT seq  +upstreamnt  +downstreamnt
atggagttcgccgccttcgccgagcgcgccgacgagatcgaggcgacctcggccgatctg
gaaatcgtctcgctcgtccgagacctcttttccgtcgccgacgacgacctcgacaccgtc
gcccggttcgttcagggccgggtgttcccggcccacgagtcgacgacgctcgacatcggt
ccgaacctctgctacgaggccatcgcccgcgcggcgggccacaacgtctccgcggacgac
gtggagtcccgggtcgcggccgtcggcgacgtgggcgacgtggcagcggagtacgacttc
ggcggccagcagggactgagtgcgttcggcggcaccgacgactcggccggtctgaccgtc
ggcgaggtcgaatcggagttgcaggacctcgcggcggcgaccgggtcgggcagccaggac
cgcaagctcgaccgtctgttcggactgttcaaccgctgtgatcccgacgaggcgcgctat
ctcgctcgaatcgtcctctcggagatgcgtatcggcgtcggcgaggggacggtcagggat
gctaccacggaggccttcgacgtccccgtcgaggcggtcgagcgcgcgctgcaggtgacc
aacgattacggactggtcgccactgtcgcacgcgaggacgggccatcgggcctcgacgat
ctgcatctggaaatcggtcggccggtacaggccatgctcgcgcaggccggtaccgtcacc
gacgccgtcgagtcctgggggtccgtcgccgtcgagaccaagtacgacggggcgcgcgtt
caggtccactacgacggggactcggtgtcgcttttctcccggaacatggaggacgtgacc
gacccgctgccggaggtcgtcgatttcgtcgaggactcgctcaccgccccggcgattctg
gacggcgaggtcgtcgccgtggacgacgacggcgacccgctcccgtttcaggagatcctg
cgacggttccgccggaaacacgacgtggcgaaggcccaggaggaggtagaggtcgaactg
tgggcgttcgactgcctccacgccgacggcgaggacctgctggacgccccactcgccgac
cgacacgcccgcctcgataccctcctcgattcgcgcgtctcgacgctcgccgttaccgac
gatcccgacgagatcgccgacatcgaggccgatgccctcgacgcgggccacgaggggatc
atgctgaaagatcccgactcgccgtactcgccgggccggcgaggaaaggagtggctcaag
cgcaaacccgacgtggagaccctcgacctcgtggtgaccggagccgagtggggcgagggc
cgccgggcggaatttctggggaccttcgaactctccgttcgggccggccccgacgagttc
gagaccatcggcaaggtggcgacgggcatcaccgacgaggaactggccgagttgaccgac
ctgctggaaccgaaggttcgcgccgaggacggcaagaccgtcgagatcgatccctcggtg
gtcttcgaggtgggctacgaggagatccagacctcgccgacctattcgtcgggatatgcg
ctccggttcccccgctatctcggcgtccgcgaagacaagaacccggagaacgcggacaca
ctgaagcgggtcgaacggctggccgacggcgagtaa

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