Haloprofundus sp. MHR1: FCF25_07925
Help
Entry
FCF25_07925 CDS
T05952
Name
(GenBank) DEAD/DEAH box helicase
KO
K03725
putative ATP-dependent RNA helicase [EC:3.6.4.-]
Organism
halm
Haloprofundus sp. MHR1
Brite
KEGG Orthology (KO) [BR:
halm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
halm03019
]
FCF25_07925
Messenger RNA biogenesis [BR:
halm03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
FCF25_07925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
QCJ47043
UniProt:
A0A4D7GZ38
LinkDB
All DBs
Position
complement(1576929..1578989)
Genome browser
AA seq
686 aa
AA seq
DB search
MSQQVAQVDTLFLHESGGRDDYTVVATRDGERLFRGRLGLKETNAGPRPGKFRIVDGSDE
VPRSPDQFVELARRASRIRISQQTSQHGRSELREMLDGYQLDALVVRTCRFCADGGRYSP
ITEETAIKTEREYICPDCAIRELERELSFKGNLTAAAQDRLEELLLDVQDLDRITNLLQG
NLDPDLTKFDEISATVEDVDPVPTSSLNLHPELQKMTEGRFENLLPVQSLSVRNGLFDGQ
DQLVVSATATGKTLVGELAGVNRALEGKGKLLFLVPLVALANQKYDDFRERYGHLANVTI
RVGASRINDDGNRFDPNADIIVGTYEGIDHALRTGKDLGDIGSVVIDEVHTLKEDERGHR
LDGLISRLKYYCEDRAERRENYGGAQWIYLSATVGNPEWLARRLEATLIEFEERPVPIER
HLTFADGQEKVRIENKLVRREFDTESSKGYRGQTIIFTNSRRRCHEISRKLEYDAAPYHA
GLDYRRRKKVERMFANQDLAAVVTTAALAAGVDFPASQVVFDSLAMGIEWLSVQEFSQML
GRAGRPDYHDKGKVYMLVEPDAAYHGSMEMSEDEVAFMLLKGEMEDVATMYDESAAVEET
LANITVAGKRAKRLNDRMLGEIPTKHAVGKLLEWKFIDGFEPTPLGRAITRHFLAPDDAF
RILDGIRNGLDPYAIVAEMELADDDY
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
gtgtctcagcaggtcgcgcaggtcgacacgctgttcctccacgagagcggcggccgcgac
gattacaccgtcgtcgccacccgcgacggcgagcggctcttccgcggccgactcggtctc
aaggagacgaacgccggtccccgacccgggaagttccgcatcgtcgacggttcggacgag
gtgccgcgaagtcccgaccagttcgtcgaactggcccgccgagcgtcgcgtatccgcatc
tcccaacagacctcccagcacggtcgaagcgagctacgggagatgctcgacggctaccag
ctcgacgcgctcgtcgttcggacctgccggttctgcgccgacggcggccgttactcgccc
atcaccgaggagacggccatcaagacggagcgggagtacatctgtccggactgcgcgatt
cgcgaactggagcgagagctctcgttcaaagggaacctgaccgcggcggcgcaggaccgc
ctcgaagagctcctcctggacgtacaggacctcgaccgcatcacgaacctgctgcaagga
aatctcgaccccgacctgacgaagttcgacgagataagcgcgaccgtcgaagacgtcgac
cccgtgccgacgagcagtctgaatctgcatcccgagctacagaagatgaccgaagggcgg
ttcgagaacctcctgccggtacagagtctctcggtccgaaacggcctcttcgacggacag
gaccaactcgtcgtcagcgcgacggcgacggggaagacgctcgtcggcgagctcgccggg
gtgaaccgtgcgttggaggggaaggggaaactactgtttctcgttccgctcgttgcgctc
gccaaccagaagtacgacgacttcagagagcgctacggccacctcgcaaacgtcacgatt
cgggtcggggcctcgcgaatcaacgacgacggcaaccgcttcgacccgaacgccgacatc
atcgtcggcacgtacgagggaatcgaccacgcgctccgaaccggaaaggacctcggcgac
atcggcagcgtcgtcatcgacgaggtgcacacgctgaaggaggacgagcggggccaccgc
ctcgacggcctcatctcgcggctgaagtactactgcgaggaccgcgcggaacgccgcgag
aactacggcggggcgcagtggatctacctctccgcgaccgtcggtaaccccgagtggctg
gcgcgacgactggaggcgacgctcatcgaattcgaggagcgacccgtccccatcgagcgc
cacctcaccttcgccgacggacaggagaaagtacgaatcgagaacaaactcgtccgccgc
gagttcgacaccgagtcctcgaaaggctaccgcggccagaccatcatcttcaccaactcg
cggcggcgctgtcacgagatttcgcgtaaattggagtacgacgccgcgccgtaccacgcc
gggttggattatcggagaagaaagaaagtcgagcggatgttcgccaaccaggacctggcg
gccgtcgtcacgacggcggcgctggcggcgggcgtcgacttccccgcctcgcaggtcgtc
ttcgactcgctggcgatgggcatcgagtggctctccgtccaggagttcagccagatgctc
ggccgtgctggacggccggactaccacgacaaggggaaggtgtacatgctggtcgaaccc
gacgccgcctaccacgggtcgatggagatgagcgaggacgaagtcgcgttcatgctcctg
aagggcgagatggaggacgtggcgacgatgtacgacgagtccgccgccgtcgaggagacg
ctggcgaacatcaccgtcgccggcaagcgcgccaagcgactgaacgaccggatgctcggc
gagataccgacgaaacacgccgtcgggaaactgctggagtggaagttcatcgacggcttc
gaacccacccccctggggcgggccatcacgcgacacttcctcgcgcccgacgacgcgttc
cggattctggacgggatacggaacggactggacccctacgccatcgtcgccgagatggaa
ctggccgacgacgactactga
DBGET
integrated database retrieval system