Halolamina sp. CBA1230: B4589_006085 Help Entry B4589_006085      CDS       T06651                                  Name (GenBank) DEAD/DEAH box helicase   KO K10843   DNA excision repair protein ERCC-3 [EC:5.6.2.4] Organism haln  Halolamina sp. CBA1230 Pathway haln03022   Basal transcription factors haln03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:haln00001]  09120 Genetic Information Processing   09121 Transcription    03022 Basal transcription factors     B4589_006085   09124 Replication and repair    03420 Nucleotide excision repair     B4589_006085  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:haln03021]     B4589_006085    03400 DNA repair and recombination proteins [BR:haln03400]     B4589_006085 Enzymes [BR:haln01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      B4589_006085 Transcription machinery [BR:haln03021]  Eukaryotic type   RNA polymerase II system    Basal transcription factors     TFIIH      B4589_006085 DNA repair and recombination proteins [BR:haln03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TFIIH complex      B4589_006085 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  ERCC3_RAD25_C ResIII Helicase_C SNF2-rel_dom DEAD AAA_22 MarR_2 AAA_25 SWI2_SNF2 SLFN-g3_helicase AAA_30 AAA AAA_11 Helicase_C_2 TrmB AbiEi_4 Motif Other DBs NCBI-ProteinID:  QKY19968 UniProt:  A0A7D5CJU4 LinkDB All DBs Position 1191000..1192865 Genome browser AA seq 621 aa AA seqDB search MTDLSLSEFYDAVEAEGRPLLTADEFARRLDAAQADADDALSRLADQGLLERVDVENDPV VWYPTEWGELASRERVVVFPDRREIVVDRPTQYTQARLSQFAHLVDTTGTEPGTRGYLYR IRPEDVWSAPFDGVADLILAMRGVFPQRYEGLEEWVESQWKRANRFRLDTHEDGYTVLTA ATDDLMGNVAMEKLDDDAIRAPISDTEAWVNEGAIANIKRTLYEAGYPVVDDRDLESGDP IDADLTTDLREYQQSWVDSFLEKQAGVLVGPPGSGKTVAALGALAAVGGETLILVPSREL AGQWREEIERHTTVDPEDVGEYHGGTKQLRPVTIATYQIAGMDRHRTLFDDREWGLIVFD EAHHVPAPVFRRSAALQSKHRLGLTATPVRESDDETDIYTLIGPPLGTDWSALFDAGFVA EPEVELRYLPWDDELAENEYASADGRERHQLAATNPRKVEEIERLLAEHDGKALVFVDYL DQGEAIADELDAAFVSGETPHHRRERLFESFRTGDREALVVSRVGDEGIDLPNAELAVVA SGLGGSRRQGAQRAGRTMRPVGRAEVVVLATHGTREEEFARKQMRHLAEKGVRVHETVVG DDTGEPSGAEGEASGDDATPE NT seq 1866 nt NT seq  +upstreamnt  +downstreamnt atgactgatctctccctctcggagttctacgacgccgtcgaggcagagggccggccgctg ctcacggcggacgagttcgcccgccgcctcgacgctgcccaggccgacgccgacgacgcg ctctcccgcctcgccgaccaggggctgctcgaacgcgtcgacgtggagaacgaccccgtg gtctggtacccgacggagtggggcgaactcgcctcccgggagcgcgtagtcgtgttcccc gaccgccgggagatcgtcgtcgaccgcccgacccagtacacccaggcccgcctctcgcag ttcgcccacctcgtcgacaccaccggcaccgaacccggcacccgcggctacctctaccgc atccgccccgaggacgtctggtccgcccccttcgacggcgtcgccgacctgatcctcgcg atgcggggggtgttcccccagcgctacgaggggctggaggagtgggtcgagagccagtgg aagcgtgccaaccgcttccgcctcgacacccacgaggacggttacaccgtcctcaccgcg gcgaccgacgacctgatgggcaacgtcgcgatggagaaactcgacgacgacgcgatccga gcacccatctccgacaccgaagcgtgggtcaacgagggcgcgatcgcgaacatcaaacgc acgctgtacgaggcgggctaccccgtcgtcgacgaccgcgacctcgaatccggcgatccc atcgacgccgacctcacgactgacctccgggagtaccaacagtcctgggttgacagcttc ctcgagaagcaggccggcgtgctcgtaggaccgccggggtccgggaagaccgtcgccgca ctgggcgcgctcgcggcggtcggcggcgagacgctgatcctcgtcccctcgcgcgaactc gccgggcagtggcgcgaggagatcgaacgccacaccaccgtcgaccccgaagacgtcggc gagtaccacggcggcacgaagcagctccgcccggtcacgatcgccacctaccagatcgcg gggatggaccgccaccggacgctgttcgacgaccgcgagtgggggctgatcgtgttcgac gaggcccaccacgtcccggcgccggtgttcagacggtccgccgcgctccagagcaaacac cgcctcggcctcaccgccacgcccgtccgggagagcgacgacgagacggacatctacacc ctgatcggcccgccgctagggacggactggtcggcgctgttcgacgccggcttcgtcgcc gagccggaggtcgaactccgctacctcccgtgggacgacgagctagccgagaacgagtac gccagcgccgacggccgcgagcgccaccagctcgccgccaccaacccccgaaaagtcgag gagatcgaacgcctgctcgccgagcacgacgggaaggcgctggtgttcgtcgactacctc gaccagggcgaggcgatcgccgacgaactcgacgccgcgttcgtctccggcgagacgcca caccaccgccgcgagcgcctgttcgaatcgttccgcacgggcgaccgcgaggcgctggtg gtctcccgcgtcggcgacgaggggatcgacctcccgaacgccgaactcgcggtcgtcgcg tcgggtctcggtggctcccgccgacagggcgcccagcgcgcgggccgcaccatgcgcccg gtcgggcgcgcggaggtggtcgtgctcgcgacccacggcacccgcgaggaggagttcgcc cgcaaacagatgcgccacctcgcggagaaaggcgtccgcgtccacgagacggtcgtcggc gacgacactggggaaccgagtggggccgagggggaagcgagcggtgacgacgcgacgccg gagtag

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