Halorubrum sp. PV6: DOS48_02715
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Entry
DOS48_02715 CDS
T05770
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
halp
Halorubrum sp. PV6
Brite
KEGG Orthology (KO) [BR:
halp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
halp03016
]
DOS48_02715
Enzymes [BR:
halp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
DOS48_02715
Transfer RNA biogenesis [BR:
halp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DOS48_02715
Prokaryotic type
DOS48_02715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AZQ13819
UniProt:
A0A3Q9EA36
LinkDB
All DBs
Position
complement(571437..572885)
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AA seq
482 aa
AA seq
DB search
MAPSDTLREAHPTERAAGIDYYVSDADGIGGRLRETPEDFRVRELEAFDPEPLGADTGSY
PELVVRVTLRDWDTNDFARRISDALGISRERVSWAGTKDKRAVTTQLFTLREVDPGDLPA
IRGADIEPLGRAGRRLSFGDLAGNAFDIRVTDAVDEAPERVADVVSDLRAFGGDAGGAED
GAAVGVPNYFGQQRFGSRRPVTHRVGLAVVREDFREAVRLYAGNPSETEPDDTRAARARV
DDAFGVAGGDAGDDAGPADGTGDGDWAACLDAIPGKLRFERSMVHRLADRGVSPDAPPDH
DDWRHALEAVPSNLQRLFVNAAQSSLFNRMLSERLRRGLPFDRPVAGDVVCFADGDASEE
LYAPDTDRLQRVDADRVSVVTRHCERGRAFVTAPLIGTETELGDGEPGAIEREVLDEAGV
EPGDFALPGEFDSTGTRRAILLRTDLDVTVDDGDPRFAFALPSGSYATVLLREFTKCGPL
DL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgtcagacacgctccgagaggcgcacccgaccgagcgcgcggcgggcatcgac
tactacgtcagcgacgccgacggcatcggcggccggctccgcgagacccccgaggacttc
cgcgtccgcgaactggaggcgttcgatccggagccgctcggggcggacacggggagttac
cccgaactcgtcgtccgcgtcacgctccgcgactgggacacgaacgacttcgcgcgacgg
atctccgacgcgctcggaatcagccgcgagcgcgtctcgtgggcggggacgaaggacaaa
cgcgccgtcaccacccagctgttcaccctccgcgaggtcgacccgggcgacctgcccgcg
atccgcggcgccgacatcgagccgcttgggcgggccggccggcgcctctcgttcggcgac
ctcgccggcaacgccttcgacatccgagtcaccgacgcggtcgacgaggcgccggagcgc
gtcgccgacgtggtgagcgacctgcgggcgttcggcggcgacgccggcggggcggaggac
ggcgcggccgtcggcgtccccaactacttcggccagcagcggttcgggagtcgccgcccc
gtcacgcaccgcgtcgggctcgcggtcgtccgcgaggacttccgcgaggcggtgcggctg
tacgccggaaacccctcggagaccgaaccggacgacacgcgggccgcccgcgctcgcgtc
gacgacgcgttcggggtcgccggaggcgacgcgggggacgacgcaggccccgccgacggc
accggcgacggcgactgggcggcctgcctcgacgcgattccgggcaagctccgcttcgag
cggtcgatggtccaccggctcgccgaccgcggcgtctccccggacgcgccgccggaccac
gacgactggcggcacgcgctggaggccgtcccctcgaacctccagcggctgttcgtcaac
gccgcgcagtcgtcgcttttcaaccgaatgctgagcgagcggctccgccgcggcctcccg
ttcgaccggccggtcgccggcgacgtggtctgtttcgccgacggcgacgcctcggaggag
ctgtacgccccggacacggaccgcctccaacgggtcgacgctgaccgcgtcagcgtcgtc
acccggcactgcgagcgcggccgggcgttcgtcaccgcgcccctgatcgggaccgagacc
gaactcggcgacggcgaacccggcgccatcgagcgcgaggtgctcgacgaggcgggcgtc
gaacccggcgacttcgcgctccccggcgagttcgactcgactgggacgcggcgagcgata
ctcctccggaccgatctggacgtgacggtcgacgacggcgacccccggttcgcgttcgcg
ctcccgagcggctcgtacgcgacggtgctcctccgggagttcaccaagtgcggcccgctc
gacctctga
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