KEGG   Halarchaeum sp. CBA1220: EFA46_003550
Entry
EFA46_003550      CDS       T06674                                 
Name
(GenBank) DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
halr  Halarchaeum sp. CBA1220
Pathway
halr03030  DNA replication
halr03410  Base excision repair
halr03420  Nucleotide excision repair
halr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:halr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EFA46_003550
   03410 Base excision repair
    EFA46_003550
   03420 Nucleotide excision repair
    EFA46_003550
   03430 Mismatch repair
    EFA46_003550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:halr03032]
    EFA46_003550
   03400 DNA repair and recombination proteins [BR:halr03400]
    EFA46_003550
DNA replication proteins [BR:halr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    EFA46_003550
DNA repair and recombination proteins [BR:halr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     EFA46_003550
   MMR (mismatch excision repair)
    Other MMR factors
     EFA46_003550
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    EFA46_003550
SSDB
Motif
Pfam: PCNA_N PCNA_C
Other DBs
NCBI-ProteinID: QLC33319
UniProt: A0A7D5DZ32
LinkDB
Position
complement(650357..651100)
AA seq 247 aa
MFKAIVSADTLRDTLDSVSVLVDECKIHLNEDGLEIRAVDPANVGMVDLELSADAFESYE
ADGGLIGVNLSRLEDIAGMADAGQLVQFELDEETRKLHIRIEGLEYTLALIDPDSIRQEP
DLPDLDLPAQVVVEGADIDRAVRAADMVSDHIALGVDAEKELFYVDAEGDTDDVHLELER
EDLIDLEAGDARSLFSLDYLKDMNKALPKDAEVTLELGEEFPVKLHFDIAEGLGSVTYML
APRIQSN
NT seq 744 nt   +upstreamnt  +downstreamnt
atgttcaaggcgatcgtgagtgccgacacgctccgggacacgctcgactccgtgagcgtg
ctggtcgacgagtgcaagatccacctcaacgaggacggcctcgagattcgcgccgtcgac
cccgcgaacgtcgggatggtggacttggaactctccgcggacgccttcgagtcctacgag
gccgacggcgggctcatcggcgtcaacctctcccgactcgaggatatcgccgggatggcg
gacgccggccagctcgtccagttcgaactcgacgaggagacccgcaaactccacatccgg
atcgagggcctcgagtacacgctcgcgctcatcgaccccgacagcatccggcaggagccc
gacctccccgacctcgacctccccgcccaggtcgtcgtcgagggcgcggacatcgaccgc
gccgtccgggccgccgacatggtctccgaccacatcgcgctcggcgtcgacgccgagaag
gaactcttctacgtcgacgccgagggcgacaccgacgacgtccacctcgaactcgaacgc
gaggacctcatcgacctggaggcgggtgacgcgcgctcgctcttcagcctcgactacctc
aaggacatgaacaaggcgctccccaaggacgccgaggtcaccctcgaactcggcgaggag
ttcccggtcaagctccacttcgacatcgcggaaggcctcggctccgtcacctacatgctg
gcgccccgtattcagtcgaattag

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