Halocella sp. SP3-1: D7D81_01545
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Entry
D7D81_01545 CDS
T05769
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
hals
Halocella sp. SP3-1
Pathway
hals00521
Streptomycin biosynthesis
hals00523
Polyketide sugar unit biosynthesis
hals00525
Acarbose and validamycin biosynthesis
hals00541
O-Antigen nucleotide sugar biosynthesis
hals01100
Metabolic pathways
hals01110
Biosynthesis of secondary metabolites
hals01250
Biosynthesis of nucleotide sugars
Module
hals_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
hals00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
D7D81_01545 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
D7D81_01545 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
D7D81_01545 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
D7D81_01545 (rfbB)
00525 Acarbose and validamycin biosynthesis
D7D81_01545 (rfbB)
Enzymes [BR:
hals01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
D7D81_01545 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
NAD_binding_10
adh_short
Sacchrp_dh_NADP
NmrA
KR
Motif
Other DBs
NCBI-ProteinID:
AZO93383
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All DBs
Position
complement(338352..339329)
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AA seq
325 aa
AA seq
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MKLLVTGGAGFIGSNFIHYILEHYDDEVLNLDKLTYAGNLNNLKGLEDNEHYKFVKGDIA
DKELVDGLMKQGVDVIINFAAESHVDRSIKEADVFIQTNISGAQVLLEAAVKYKINKFIQ
VSTDEVYGSLGAQGLFTEEDLLQPSSPYSASKAGADLLVDAYHKTYGLPVNITRCSNNYG
PYQYPEKLIPLLITNALNNRELPLYGDGGNIRDWIHVGDHCRAVDVVLRSGKAGEIYNIG
SNNEKRNIEIAEAIINILGKDRGLIKFVKDRPGHDRRYAIDYTKLRQDLGWRPKYDFSRG
LKETIEWYCTNEDWWRVLKTHRMEK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgctggttaccggtggagctggttttattggttcgaattttatccattatatt
ttagaacattatgatgatgaagtgcttaatcttgataaactgacttatgctggtaactta
aataatcttaagggactggaagataatgaacattataaatttgtcaaaggggatattgct
gataaagagcttgttgatgggttaatgaaacagggtgttgatgtaataattaactttgct
gcagaatctcatgttgaccggagcattaaagaggctgatgtctttatccagacaaatatt
agcggtgctcaggttctcctggaggctgctgttaaatataaaataaataaatttattcag
gtctctactgatgaagtctatggttcattaggtgctcaaggattatttactgaggaagat
ttactccagcccagcagtccttattctgccagcaaagcaggggctgatctactggtcgat
gcttatcataaaacctatggcctccctgtcaatattacccgctgttcgaataactacggt
ccctatcaataccctgagaaattaataccccttcttattactaatgccttaaataatagg
gaactacccctatatggtgacggcgggaatatcagggactggattcatgtaggagatcac
tgtcgggcagtagatgtggtgctgcgtagtggaaaagcaggggagatatacaatattggt
agtaataatgagaaaaggaatatagagatagcggaggctattattaatatacttggtaaa
gaccgggggttaattaagtttgttaaagacagacctggacatgataggagatatgctata
gattatacaaaacttagacaggacctcggctggagacctaaatatgatttttccagggga
ttaaaggagacaatagagtggtattgtactaatgaagattggtggagggtattaaaaact
cataggatggaaaagtag
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