Halomonas sp. R57-5: HALO1661
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Entry
HALO1661 CDS
T04029
Name
(GenBank) Exodeoxyribonuclease V, subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ham
Halomonas sp. R57-5
Pathway
ham03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HALO1661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ham03400
]
HALO1661
Enzymes [BR:
ham01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HALO1661
DNA repair and recombination proteins [BR:
ham03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HALO1661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
AAA_11
UvrD_C_2
Viral_helicase1
RecD_N
AAA_22
Helicase_RecD
SH3_13
UvrD-helicase
AAA_16
AAA_28
SLFN-g3_helicase
nSTAND3
UvrD_C
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
CEP35343
UniProt:
A0A0D6E6G8
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All DBs
Position
I:complement(1791511..1793808)
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AA seq
765 aa
AA seq
DB search
MSNRDTQSMNLDLFADEAPPAAPDSTASVTPPTESAASATQPHPALSDTAALFLLCERWV
SRGWLRDLDLALVRFLDRETQNAPPLLLLGAALASHQLGRGHVCLDIASTLEAPDFALSL
PPEGDDLNDPPPLPSHVLTTLTLPEWQAAFNHPTLISDGPGNTPLVKSDSSLTTRLYLRR
YWQFEQTLHQEIAHRVSVDSQADSPLLKSALNTLFPASNSIDWQKTACALAARSPFAIIT
GGPGTGKTTTVVRLLALLQTLQLAQPNAHPLRIRLAAPTGKAAARLNESIAGQVSKLPFK
GLISLWEAALAGEEKATELLQATIPTEVTTLHRLLGARADTRHFRHNAANPLALDVLVVD
EASMVDIEMMTALLSALPASAKLVLLGDKDQLASVEAGAVLGDLCRRADAAHYTPATAKW
LSELTDHPLPKVLIDPDGQPLDQAITMLRVSHRFTETSGIGQLAQAINQPLSEALRERDK
HQAVHGVLNNSYADLHHLVLKPNAQNEDSALERLVITGSPERFPNAGEGRTNFKGESIAP
PTGYCHYLNTLDSERLDTALAFEENRDVYDAWAKQVLNAYSRFQLLCALRKGPWGVEGLN
LRIAKTLRSEKLLFGNDHTLEKGWFEGRPVLVTQNDYGLKLMNGDIGITLAAPDPRTPGK
SLLRVAFPTSDPENPIHWVLPSRLHAVETVFAMTVHKSQGSEFQHTALLLPQTPNPILTQ
ELVYTGITRARDWLTVIEAKRGILNDAVTREVMRVSGSGEVKTYA
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatagagacacacaatctatgaacctagacctgttcgccgatgaggcgccgccc
gctgcacctgattcaaccgcatcggtaacaccaccgacagaatcagccgccagtgctacc
cagccgcaccccgcgctaagcgacacagccgcgctattcctgctgtgtgagcgttgggtt
tcccgtggctggctgcgggatctggatctggccctggtgcgctttctcgaccgtgaaacc
caaaacgccccgccactgctgttgctaggcgcagcgttggccagccaccagcttggccgt
ggccatgtctgcctggatatagcctccaccctggaagcgccggattttgcgctttcgctg
ccgccggaaggcgacgacctgaacgacccgccgccgctgcccagccatgtactgaccacg
ctaacgctgcccgagtggcaggccgcgttcaaccaccccacactgatcagcgacggcccc
ggcaatacgcctttggtgaaaagcgattcctcgctcaccacccggctctacctgcgccgc
tactggcagttcgagcaaaccctgcaccaggaaatagcccaccgggttagtgtggatagc
caggcggatagcccgttactaaaaagcgcgctgaatacgctattccccgccagcaacagc
atagactggcaaaaaactgcctgcgccctagccgcccgcagccccttcgcgatcatcacc
ggcggccccggcaccggtaaaaccaccacggttgtgcgtctgctggccctgctgcaaacc
ctgcaactggcccagcccaacgcccatccgctgcgcatccgcctggccgcccccaccggc
aaagccgccgcacggctaaatgaatccatcgccgggcaggtgagcaagctacctttcaaa
gggctaatatcattgtgggaggcagctttagctggcgaagaaaaggccacagagctgctt
caagccactatccctacagaagtcaccacacttcaccgcttattaggtgccagagccgac
acccgccacttccgccataacgccgccaacccgctggcgttggatgtgctggtggtagat
gaagcctcaatggtggatatcgaaatgatgacggcgctgctcagcgccctacccgccagc
gccaagctagtgctgctgggggataaagaccagctggcatctgtagaagcaggcgccgtg
ctgggcgacctatgccgccgcgccgacgctgcccactacacccccgccacggcaaagtgg
ctttccgaacttaccgaccacccgctgccaaaggtattaatcgacccggacggccagccg
ctggatcaagccattaccatgctgcgggtaagccaccgctttactgaaacaagcggcatc
ggccagctcgcccaggcgattaaccagccgctaagtgaggcattgcgggaacgggataaa
caccaagccgtgcatggcgtactgaataacagctacgccgacctgcaccacctggtgttg
aagccaaacgcacaaaacgaagacagcgccctggagcgcttggtgatcaccggcagcccg
gaacgctttcccaacgcaggcgaaggccgcaccaatttcaagggcgagtccattgccccc
cccaccggctactgtcactacctaaacacattagatagtgagcggcttgatacggcactg
gcgtttgaagagaacagagacgtttacgatgcgtgggctaagcaagtactcaacgcctac
agccgctttcagctgctatgcgcgctacgcaaaggcccgtggggagtagaaggcttaaac
ctgcgcatagccaaaacgttacgcagtgaaaagctgctgttcggcaacgaccacacgctg
gaaaaaggctggtttgaaggccgcccggtcttggtcacccaaaacgactacggtctgaaa
ctgatgaacggcgatatcggcatcaccctcgccgcgcctgacccgcgcacgccgggtaaa
tcgttactgcgcgttgcctttccgaccagtgacccggaaaacccgatccactgggtgctg
ccctcccgcctacacgcagtagaaaccgtgttcgccatgacggtacacaaatcccaaggc
tcggaattccagcacaccgccctgctgctaccgcaaacgcccaacccaattctcacccaa
gaactggtctacaccggcatcacccgcgcccgcgattggcttacggtgatcgaagctaag
cgtgggatattgaatgatgcggttactagggaggttatgcgggtgagtggatctggcgag
gttaaaacctatgcttaa
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