Helianthus annuus (common sunflower): 110878075
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Entry
110878075 CDS
T05101
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
han
Helianthus annuus (common sunflower)
Pathway
han04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
han00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110878075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
han04131
]
110878075
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
han04147
]
110878075
Membrane trafficking [BR:
han04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
110878075
Exosome [BR:
han04147
]
Exosomal proteins
Proteins found in most exosomes
110878075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
Motif
Other DBs
NCBI-GeneID:
110878075
NCBI-ProteinID:
XP_021982022
LinkDB
All DBs
Position
9:102879790..102892727
Genome browser
AA seq
1698 aa
AA seq
DB search
MAAANAPITMKEALTLPSIGISPQFITFTNVTMESDKFICVRETSPQNSVVIIDMSMPMQ
PLRRPITADSALMNPISKILALKAQLPGTTQDHLQIFNIEMKAKMKSHQMPEQVVFWKWI
TPKMLGMVTQTSVYHWSIEGDSEPVKMFDRTANLSNNQIINYKCDPSEKWLVLIGIAPGS
PERPQLVKGNMQLYSVDQQRSQALEAHAASFASLKVPGNENPSILISFATKSSNAGQVTS
KLHVIELGAQPGKASFTKKQADLFFPPDFADDFPVAMQISNKYGLIYVITKLGLLFVYDL
ETATAVYRNRISPDPIFLTSEASSVGGFYAVNRRGQVLLATVNESTIVPFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTKGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYSPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHAHLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRALQHYSELPDIKRVIVNTHAI
EPQSLVEFFGTLSKEWALECMKDLLLVNLRGNLQIIVQVAKEYCEQLGVEACIKLFEQFK
SYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPQVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTSKNSLFKLQARY
VVERMDGDLWEKVLNPENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYVNRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVDVLLDNIQSIPRAVEFAYRVEEDAVWSQVAKAQLKEGLVSDAIE
SFIRADDATQFLDVIRASEDTDCYHDLVKYLLMVRNKIKEPKVDSELIYAYAKIDRLSDI
EEFILMPNVANLHNVGDRLFDEELYEAAKIIYAFISNWAKLAVTLVRLQQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRHEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTVMNHSPEAWDHMQFKDIAVKVANVELYYKAVHFYLEEHPDLINDVLNVL
ALRVDHTRVVDIMRKAGQLPLVKPYMVAVQSNNVSAVNEALNEIYVEEEDYDRLRESIDL
HDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDKVYKDAMETASQSGD
RELAEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELAWLNNMIDFAFPYLLQFIREY
TGKVDELIKDKIEAIKESKAKENEEQDIVKQQNMYAQLLPLALPAPPGMGGGFAPPPPMG
GMGMPPMPPFGMPPMGSY
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgctaacgctccgataactatgaaggaagcacttacgttgccgagcataggg
atcagtccgcagtttattacgttcacaaatgtaacgatggagtcggataagtttatatgt
gttcgcgaaacgtctcctcagaatagcgttgtgatcattgacatgagcatgccaatgcag
ccgctaaggaggccaattacggctgactcggctcttatgaatccgatttcgaagattctg
gctttgaaagctcaacttcctgggacaactcaagatcacctgcagatatttaatattgag
atgaaagcaaaaatgaagtcacatcagatgcctgagcaggtagtcttttggaagtggatt
acacctaagatgttgggcatggtaacccagacctcagtatatcattggtccattgaaggt
gattctgaacctgtgaagatgtttgatagaacagccaatctatcaaataatcagataatt
aattacaaatgtgatccatctgagaaatggctggtgttgattggaattgcccctggctca
cctgagagacctcagttagtcaaaggaaatatgcaactatattctgttgatcagcagcga
agtcaagctcttgaagcacatgcagcatcttttgccagcttgaaagttccaggcaatgag
aacccttcaattctcatttcttttgcaacaaaaagttctaatgctggacaggttacttca
aagctgcatgttattgagcttggcgcccaaccagggaaggcctcattcactaagaaacaa
gcagacctcttttttcctcctgactttgcagatgattttcctgtggccatgcagatatcc
aacaaatatggtttgatctatgtcatcaccaagctgggtctcttatttgtgtatgatctt
gaaaccgccactgcggtttatagaaacagaataagcccagatcccattttcctgacatct
gaagcttcatcagttgggggcttctatgcagtaaatagacgtggacaggtgttacttgct
actgtgaatgaatccacaattgttccatttgttagtgggcagttaaacaacctggagctt
gctgtcaatcttgccaaacgtggaaacctacctggtgcagagaatttggttgttcagcgt
ttccaagaattgtttgctcaaaccaaatacaaagaagctgctgaactggctgctgaatct
cctcaaggcattctccgtacaccggatacagttgcaaaatttcagagtgtacctgtgcaa
gctggacaaacaccaccattactgcagtactttgggaccttactgacaaaaggaaaacta
aatgcgtttgaatctttggaactatcacgattagtcgtcaatcaaaacaaaaagaatctt
ctagaaaattggttagctgaagacaagctggaatgtagtgaggaactcggagaccttgtg
aagacagtggataatgatcttgctttgaaaatatacattaaagcgagagcgaccccaaaa
gttgttgcagcttttgctgagagaagggagtttgacaaaattctcatttactccaagcag
gttggatattcacctgattatttgttccttctgcaaacaattcttcgcacggacccgcag
ggagctgttaattttgctttaatgatgtcccaaatggaaggaggttgccctgttgattac
aacaccattacagatcttttccttcagaggaacttgatacgagaggcgacagctttcctc
ttggatgttttgaagcccaacttgccagaacatgctcacctacaaactaaggtccttgaa
atcaaccttgtaacattccctaatgttgctgatgccatattagctaatggtatgttcagt
cactatgatcgtcctcgaattgctcaactatgtgagaaagccggtctttatgtccgcgcc
cttcagcattatagtgaactaccagatatcaaacgtgttattgtgaatactcatgcaata
gagccacagtctcttgtagaatttttcggaactttatcaaaagaatgggcgcttgagtgc
atgaaggatcttttactggtcaatttgagaggaaaccttcagataattgttcaggttgca
aaagaatattgtgagcaacttggtgttgaagcatgtattaaactttttgaacaattcaaa
tcatatgaaggcctctacttctttctgggatcgtatttgagttccagtgaggatcctgac
atacacttcaagtacatcgaggctgctgcaaaaactggtcaaattaaggaggtagaacgt
gtcactagggagtcaaatttctatgatgctgaaaagaccaaaaactttttaatggaagcc
aagcttcctgatgcaagaccattgatcaatgtctgtgatcggtttggctttgttccagat
ctcactcactacctctataccaacaacatgcttcggtatattgaaggttatgttcaaaag
gtcaaccctgggaatgctccacaagttgttggacagcttctagatgatgagtgccctgaa
gatttcatcaaaggtttgattttgtcagttcgttctctgcttccagttgagccgcttgta
gatgagtgtgaaaagaggaaccgacttaggttattaactcaatttttggagcatttggtg
agtgaaggaagccaagatgtacatgttcataatgctttgggtaagattatcattgatagc
aataacaacccggagcacttccttaccacaaacccatattatgattcccgtgttgtgggg
aaatactgtgagaagcgtgatcctacgctcgctgtcgttgcttatcgcagaggccaatgt
gatgatgaactcattaatgtcacaagcaaaaactccctattcaaactgcaagcaaggtat
gttgtggagaggatggatggcgatctttgggagaaggttcttaacccggagaatgaatac
agaaggcaactaattgatcaggttgtttctactgctttgcctgagagcaagagccctgag
caggtttccgctgctgttaaagctttcatgactgctgatcttcctcatgaactaatcgag
cttctcgagaaaattgtcctccaaaactctgctttcagtgggaatttcaatctacaaaac
ctgcttattttgacagccattaaagcagacccatcacgagttatggactacgttaatagg
ttagataactttgacggacctgcggttggtgaggtggccgtagaagcacagctttacgaa
gaagcatttgcgatattcaagaaattcaacttaaatgttcaagcagtcgatgttctgttg
gataatattcaaagtattccacgggctgttgagtttgcataccgtgttgaagaagacgcg
gtatggagccaggtggcaaaagcacagctcaaggagggattggttagtgatgcaattgag
tcgttcattcgtgctgatgacgctactcaattcttggatgttattcgtgcttctgaagac
acagattgctaccatgatttggttaagtatcttttgatggttagaaacaagatcaaggag
ccaaaggtagacagtgagctcatctacgcatacgcaaagattgacaggttgagtgatatt
gaggaatttatcctcatgccaaatgttgcaaatcttcataatgttggcgatcgtttgttt
gatgaagagttgtatgaagccgctaagataatatatgcttttatctccaactgggctaag
cttgctgttacacttgtgaggctacaacagtttcaaggtgccgtcgacgctgctcgtaaa
gcaaatagtgcaaagacatggaaagaagtttgctttgcttgtgttgatgccgaggagttc
cgattggctcagatttgcgggctcaatatcattgtgcaggtggatgatctggaagaggtg
agtgaatactaccaaaacagaggatgcttcaatgagcttatatctctcatggagagtggt
ttagggttggaacgggcccacatgggcattttcaccgagttgggtgtcttatatgcccga
taccgtcacgagaagttaatggagcatataaaactcttttcgacccgtctcaacatccca
aagttaatccgcgcttgtgatgagcaacaacactggaaagagcttacttacctatacatt
caatatgacgagtttgacaatgctgcgacaactgtcatgaatcattccccggaagcttgg
gatcatatgcagtttaaggatattgcagttaaagttgcaaatgtcgaactttattacaag
gcggttcatttctatttagaagaacatcccgaccttattaatgatgttcttaatgttctt
gctctacgtgttgaccatacacgtgttgtagacatcatgcgcaaggcgggtcaacttcct
ttagtcaaaccatatatggttgcagttcagagcaacaacgtatctgctgtgaatgaagct
ttgaatgaaatatacgttgaggaggaagattacgatagattgcgtgaatctattgatttg
cacgataactttgaccagattggtcttgcacagaagattgagaaacacgagcttcttgag
atgaggcgtgtagctgcatatatttacaaaaaagccggtagatggaagcagtctattgca
ctgtccaaaaaagacaaggtttacaaagatgcaatggagaccgcttcgcaatctggggac
cgtgagctggctgaagagttgcttgtttatttcattgagcagggaaagaaggaatgcttt
gcttcctgtctatttgtgtgttatgatctcatccgcccagatgttgctctcgagctagcc
tggttaaacaacatgattgattttgctttcccatatctgcttcagtttatccgggaatac
accggcaaggttgatgagctgatcaaagacaagatcgaagcaattaaggaaagtaaggcc
aaagagaacgaggagcaggatattgttaaacaacagaatatgtatgctcagctactacct
cttgcactacctgctccaccgggtatgggtggaggatttgctccaccaccacccatgggt
ggaatggggatgccgccaatgccgccgtttggaatgccgccaatgggttcttattga
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integrated database retrieval system