KEGG   Helianthus annuus (common sunflower): 110889516
Entry
110889516         CDS       T05101                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03030  DNA replication
han03410  Base excision repair
han03420  Nucleotide excision repair
han03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    110889516
   03410 Base excision repair
    110889516
   03420 Nucleotide excision repair
    110889516
   03430 Mismatch repair
    110889516
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:han03032]
    110889516
   03036 Chromosome and associated proteins [BR:han03036]
    110889516
   03400 DNA repair and recombination proteins [BR:han03400]
    110889516
DNA replication proteins [BR:han03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    110889516
  DNA Replication Termination Factors
   ELG1-RFC complex
    110889516
Chromosome and associated proteins [BR:han03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    110889516
DNA repair and recombination proteins [BR:han03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     110889516
  Check point factors
   HRAD17(Rad24)-RFC complex
    110889516
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 Rad17 RuvB_N AAA_11 AAA_16 AAA_5 Mg_chelatase AAA_14 AAA_assoc_2 AAA_24 SLFN-g3_helicase nSTAND3 ResIII AAA_2 DNA_pol3_delta AAA_18 PhoH AAA_19 AAA_7 AAA_28 AAA_30 DUF3853 Parvo_NS1 RNA_helicase AAA_25 bpMoxR TIP49_C DUF815 TIP49 IstB_IS21 ATPase_2 AAA_17 NB-ARC SPOUT_MTase
Other DBs
NCBI-GeneID: 110889516
NCBI-ProteinID: XP_021992756
LinkDB
Position
11:complement(9737404..9744183)
AA seq 341 aa
MAPLLQSSQPWVEKYRPRRVNEVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL
AIAHQLYGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSAHQGGYPCPPFKIIIL
DEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEDIMST
RILHICTEEGLNLDSEALSTLSSISQGDLRRAITFLQGAARLFGSSISSKDLISVSGVIP
HEVVQALLAACKSGSFDNANKEVNNVIAEGYPVSQMLSQLFDMVVESEDTSDEQKARICK
KFGETDKCLVDGADEYLQLLAACSSMIKAYSNMPEVYSNDM
NT seq 1026 nt   +upstreamnt  +downstreamnt
atggcgccattgctgcagagctctcaaccttgggtcgagaaataccgaccgaggcgagtg
aatgaagttgcgcatcaagatgaggttgttcgagtccttaccaacacgctcgagaccact
aattgtccgcacatgctgttttatggtccacctggaaccggaaaaactaccactgcactt
gccattgctcatcagctttacggtcctgaactctacaagtcaagggttcttgagctcaac
gctagtgatgatcgtggaatcaatgtagttcgaactaagataaagaattttgctgcagtt
gccgttggttctgctcatcaagggggttatccttgcccgccttttaaaattataatcctc
gatgaggcagattcaatgactgaagatgcacagaatgctttacgtcgtactatggaaacc
tactcaaaagtaacacgattcttctttatatgcaattacatcagcaggattatagaacct
cttgcttctagatgtgcaaaattcaggttcaagccactctcagaagatatcatgagcact
cgtatactgcatatttgtacagaagagggccttaacttggactcagaggctctctcaacc
ttaagttccatatctcaaggagatcttcgtcgcgctataactttcctgcagggagctgct
cgcctgtttggatcttcaatttcttccaaggatttgattagcgtttctggggtcatcccg
catgaagttgttcaagctcttcttgcagcttgtaaaagcggatcatttgataatgcaaac
aaagaagtcaataatgttattgcagaggggtatcccgtcagtcagatgctttctcagttg
tttgacatggtggttgaatctgaagatacttctgatgaacaaaaagcaagaatatgcaaa
aaatttggtgaaacagataagtgtcttgttgatggagcggatgagtatttgcaactgttg
gctgcttgcagctctatgatcaaagcgtattcaaacatgcctgaagtatattccaacgac
atgtag

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