Helianthus annuus (common sunflower): 110935525
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Entry
110935525 CDS
T05101
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110935525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
han03041
]
110935525
03009 Ribosome biogenesis [BR:
han03009
]
110935525
Spliceosome [BR:
han03041
]
Complex A
U1 snRNP components
U1 related factors
110935525
Complex B
110935525
Ribosome biogenesis [BR:
han03009
]
Eukaryotic type
Pre-60S particles
Helicases
110935525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
110935525
NCBI-ProteinID:
XP_022033596
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All DBs
Position
4:3260833..3272559
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AA seq
498 aa
AA seq
DB search
MSRYDSRSGDPASYRDRKSDSGLGGYNSSSSKRDYESTEPQKKVDLDGLIPFEKNFYVES
PNIAKMSESEVEEYRAKREITVEGRDVPKPIKTFSDARFPDYVMQEVEKAGFTEPTAIQA
QGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQ
IQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRV
TYLVLDEADRMLDMGFEPQMKKIVSQIRPDRQTLYWSATWPKEVEQLARQLLYNPYKVVI
GSSELKANHSIHQHVDIMTENQKYNKLVKLLDDIMDGSRILIFMDTKKGCDQITRQLRMD
GWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLED
YVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILQEAGQKVNPDLAAMGRGAPPPPSG
HGGFRDRGRGYSGGRSWN
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgttacgacagccgttccggcgatcccgcttcctaccgcgaccggaaaagtgat
tcaggattaggcgggtataactcttcatctagcaagagggactatgaaagtaccgagcct
caaaaaaaggtggatttagatgggctgattccttttgagaagaacttctatgtggaatct
ccgaatatcgcaaaaatgtcggagagcgaggtggaagaatatagggcaaaaagagaaatt
accgttgaaggtcgcgacgtgcctaaacctattaagacgttcagtgatgcgagatttcca
gattatgtgatgcaagaagttgagaaagcgggcttcacagagcctactgctatacaagct
caaggatggccgatggctttaaaaggccgagatctcattggaattgccgaaacgggatcc
ggaaagacactcgcttatttactgcctgcgatcgtgcacgttaatgctcaaccaatctta
tcccctggagatggaccaattgtgttggttttagctccgactcgtgaactggcggttcaa
atacaacaagaagcaactaaatttggcgcatcgtcaaagattaagaacacttgcatatac
ggtggggtcccaaaagggcctcaagttcgtgatttacagaaaggtgttgaaattgttatt
gcgacacctggaaggttaattgatatgctggagtctcatcacacaaacttgcggagggtc
acgtatctcgtgctcgatgaagcggaccggatgctagacatgggttttgaaccgcaaatg
aagaaaattgtttcccagattcggccagatcgtcaaactttgtactggagtgctacatgg
ccaaaggaagttgagcaacttgcaaggcagttgctttataacccttacaaagtggtgatt
ggttcttcggaattgaaagctaaccattcaattcaccaacatgtggatattatgaccgaa
aatcagaagtataacaaattggtgaagctgttggatgacatcatggacggtagtcgtata
ctgatatttatggacaccaaaaaggggtgtgaccaaatcactcgccagctcaggatggac
ggttggcctgctttgtctattcacggagataaaagtcaagcagagagagattgggttcta
tccgagtttaaatccggtaaaagcccaataatgaccgccacagatgttgcagcccgcggg
ttagatgtgaaggatgttaaatacgtgataaattacgactttccgggttcattggaagat
tacgttcataggattggtcgaacaggaagggctggggctaaaggcacagcgtacaccttt
tttacagcagcaaatgccaggtttgctaaagaacttatagcaattcttcaggaggccggt
caaaaagtcaaccccgatctagcggcaatgggtcgtggtgctcctcctcctccatcagga
catggtggctttcgtgatcgtggtcggggttacagcggtggtcgatcttggaactga
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