Helianthus annuus (common sunflower): 110940942
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Entry
110940942 CDS
T05101
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 12
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
110940942
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
han01002
]
110940942
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
han04121
]
110940942
Enzymes [BR:
han01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110940942
Peptidases and inhibitors [BR:
han01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
110940942
Ubiquitin system [BR:
han04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110940942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
DUF6612
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
110940942
NCBI-ProteinID:
XP_022038205
LinkDB
All DBs
Position
5:complement(111195361..111220606)
Genome browser
AA seq
1115 aa
AA seq
DB search
MTLMTPPPIDPEEEEMLVPHSEFAAAEGPQPMEVAPAEAVNAVDAPVVDDPPTARFTWTI
ENFSRLTGKKLYSEVFFVGGYKWRVLIFPKGNNVDHLSMYLDVADSTTLPYGWSRYAQFS
LAVVNQIHSKFTMRKDTQHQFNARESDWGFTSFMPLSELYDPSRGYLLNDTCVVEAEVAV
RKVVDYWSHDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGS
IPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTV
VEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEG
DNKYHAEQHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDR
ENGKYLSPQADRSVRNLYTLHSVLVHSGGVHGGHYYAYIRPTLSDQWLKFDDERVTKEDM
KRAMDEQYGGEEELPQANPGFNNSPFKFTKYSNAYMLVYIRESDKEKIICNVDEKDVAEH
LRIRLKKEQEEKEQKRKEKAEAHLYTIIKVARDENLHEQIGKNIFFDLVDHDKVRSFRIQ
KQVSFALFKEEVAKELGIPVQCQRFWLWAKRQNHTYRPNRPLTPLEEAQSVGHLREVSNK
ANNAELKLFLEVELGQNSQPIPPPAKTKEEILLFFKLYDPLKEELRYVGRLFVKGTGKPT
EILTKLNELAGFAPNEEIELFEEIKFEPNVMCEHVDKKLTFRASQLEDGDIICFQKPLQA
GTVKCRYPDVPSFLEYVHNRQVVRFRSLEKPKEDEFSLELSKLHNYDDVVERVASQLNLD
DPLKIRLTSHNCYSQQPKPQPIKYRGVEHLSDILAHYNQTSDILYYEVLDIPLPELQGLK
TLKVAFHHATKDEVVIHTIRLPKQSTVGDVINDLKTKVELSHKDAELRLLEVFYHKIYKI
FPLNEKIENINDQYWTLRAEEIPEEEKDLGPQDRLIHVYHFTKDTSQNQQVQNFGEPFFL
VIREGETLAEVKLRIQKKLQVPDEEFSKWKFAFLSLGRPTYLQDSDVVSTRFQRRDVYGA
WEQYLGLEHSDTTSKRSYAANQNRHTFEKPVRIYN
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgactctcatgactccgcctccaattgatccagaagaggaagagatgctagtgccacat
tcggagtttgctgcagctgaaggacctcaaccgatggaagttgcacctgcggaagctgtt
aatgctgttgatgcaccggtagttgatgatccgccaacagcaaggtttacgtggacgata
gagaatttctcgagattgactggcaagaagttgtactctgaagttttctttgttggtgga
tataaatggcgagtgcttatattcccgaaaggaaacaacgtggaccatttgtcaatgtat
cttgatgttgctgattccaccacattgccatatggttggagtagatatgctcagtttagc
ctagctgtggttaatcaaattcatagcaagttcaccatgcgaaaagatacccagcatcag
ttcaatgcccgagaaagtgattggggtttcacgtcatttatgcctcttagtgaactatac
gaccccagtagaggatatcttttaaacgatacatgcgtagttgaagctgaagtggcagtc
cggaaggttgttgattactggtcacatgattcaaagaaagaaaccggttatgttgggctt
aaaaatcaaggtgctacttgctatatgaactctttacttcagacattgtaccacatccct
tatttcaggaaggctgtgtatcacatgcccacaaccgagaacgatatgccgtcagggagc
attcctctggcgttacaaagtctattttacaagcttcagtacagtgacacaagtgttgcc
acaaaagagttgaccaaatctttcggttgggatacgtatgattcttttatgcagcatgat
gttcaggaactcaatagggttctttgtgagaaacttgaagataaaatgaagggaactgtt
gtggagggcacaattcaacagttattcgaagggcatcatatgaactacattgaatgcata
aatgttgactacaagtcaacaaggaaggaatcattttatgaccttcagcttgatgtcaaa
gggtgtcgtgatgtctatgcttcttttgacaagtatgtggaggttgaacgacttgaaggt
gataacaagtatcatgctgagcaacatgggttacaggatgcaaagaagggtgttctgttc
attgatttcccccctgttcttcagctccaactaaaacgttttgaatatgatttcatgcga
gatacaatggtgaagataaatgatcgctatgaatttccattgcaacttgatcttgataga
gaaaatgggaagtatttgtcaccccaggcagacagaagtgttcgcaatctgtatactctt
cacagtgtattggttcacagtggtggcgtccacggtggacactattacgcctatattcgg
ccaacactctctgatcagtggctgaaatttgacgatgaacgtgtaactaaagaagacatg
aagagagcgatggatgaacaatatggaggcgaggaagagttacctcaagcaaatcctggg
ttcaataactctccatttaagtttacgaagtattcaaatgcgtatatgcttgtgtacata
cgtgaaagtgacaaggagaaaataatctgtaatgttgatgagaaggatgtggcagagcac
ctgaggataagattgaagaaagaacaagaagagaaagagcaaaaaaggaaagagaaagca
gaagcacatttgtataccatcataaaggttgctcgtgatgagaatctccatgaacaaata
gggaaaaacatatttttcgatctagtggatcatgataaagttcgtagtttccgtatccaa
aagcaagtatcttttgcccttttcaaggaggaagtagctaaagaattgggtataccggta
caatgtcaacgtttctggctttgggctaagcgtcaaaatcatacttatcgtccaaatcgt
ccattgactcctctagaagaagctcagtctgttgggcatttgagggaggtatcgaataag
gctaacaatgctgaacttaagttgtttcttgaggtagaacttgggcagaattcacagcca
attcccccacctgcaaaaactaaggaggagattttacttttctttaagctttatgaccct
ttaaaagaggagcttcggtatgttgggcggctcttcgtgaagggtactggaaagcctaca
gaaatactgacaaagctaaacgaactggctggctttgcgcctaatgaagaaatagaactc
tttgaggaaattaagtttgaacctaatgttatgtgcgaacatgttgataaaaagctcaca
tttagggctagtcagcttgaagacggggacatcatttgcttccagaaacctcttcaggct
ggaactgtaaaatgtcgctatcctgatgttccatcttttctagagtatgttcataatcgc
caggttgtgcgttttcgttcactggagaaaccgaaggaggatgagttctcactggaattg
tcaaaactccacaattatgatgatgttgttgaaagggttgcctcccaattaaacttagac
gatccattgaaaatcaggcttacgtctcataactgttattcccaacaacccaaacctcaa
ccaattaaatacagaggagtggaacatctgtcagacattctggcacactacaatcagact
tcagatattttgtattatgaagtacttgatattcctcttcctgaactacaaggtctgaaa
accctaaaggttgcttttcatcacgcaacaaaagatgaagtggttatacatactattaga
ttgccaaaacaaagcactgtcggtgatgtcatcaatgaccttaagacaaaggtcgagttg
tctcataaagatgcagagcttcgattgcttgaagtcttttaccacaaaatttacaagatt
tttcctctgaacgaaaagattgagaacatcaatgatcaatactggacgttacgtgctgag
gagattccagaagaggaaaaggaccttggtccacaggatcgtctaattcatgtttatcat
tttacgaaagacacatctcagaaccagcaagtgcagaacttcggggaaccattttttctt
gtgattcgagagggtgaaacgttagctgaagttaaattacgcatacagaagaaactacag
gttcccgatgaggaattttctaagtggaagtttgcatttctctctttgggtcgtcctaca
taccttcaggattctgatgttgtctccacccgttttcagagaagagatgtttatggcgct
tgggaacagtacttgggattggagcattccgacacaacatccaaacgctcatatgctgca
aatcagaaccgacatacatttgagaaaccagttagaatctacaactag
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integrated database retrieval system
