Halothece sp. PCC 7418: PCC7418_3438
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Entry
PCC7418_3438 CDS
T02379
Name
(GenBank) nucleic acid binding OB-fold tRNA/helicase-type
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hao
Halothece sp. PCC 7418
Pathway
hao03030
DNA replication
hao03430
Mismatch repair
hao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PCC7418_3438
03430 Mismatch repair
PCC7418_3438
03440 Homologous recombination
PCC7418_3438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hao03032
]
PCC7418_3438
03400 DNA repair and recombination proteins [BR:
hao03400
]
PCC7418_3438
Enzymes [BR:
hao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PCC7418_3438
DNA replication proteins [BR:
hao03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PCC7418_3438
DNA repair and recombination proteins [BR:
hao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PCC7418_3438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HHH_6
tRNA_anti-codon
Intein_splicing
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
AFZ45552
UniProt:
K9YGD3
LinkDB
All DBs
Position
complement(3720290..3721639)
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AA seq
449 aa
AA seq
DB search
MVKIIKRQSLGRQNVYDIGVETDHNFVLANGCVASNCFNKSHSTAYAYVTYQTAYLKANY
PVEYMAALLTASSNNTDKIEKYIDTCRRMNIDVEPPDINRSQIDFTPDNEKILFGLSAVR
NLGQGAIENILAAREEAGGTFTSLADLCARIDLHTVNRRALEALIYCGAFDKINSNRNQL
LHDLEPVLSWAQSRAKDKASGQTNLFEALNSSQEEDHNRSDYKDVPTASPVEDFSATDKL
KHEKDLLGFYVSDHPLKTTKPASAMLSAVMLGDQEHIPKKKPISAIILLTEVKKIMTRNN
EPMAFVQMEDISGQMEGVIFPSSYERISPYLEEDARLIVWGKIDEKDDRLQMIIDDAEPI
EQVKMVMVDFSFDQARDRAHQQKLQQTLKQFVAKKNEAKVPVIGRIKVGNQQQLIRFGQQ
YWVKDANLASQELKAQGFQAEANALVATA
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaaattatcaagcgtcaatccctcggaagacaaaatgtttatgatattggtgtc
gaaaccgatcataattttgttttagctaacggttgtgttgcgtccaattgtttcaataaa
tctcactctactgcttatgcttatgtgacctatcaaacggcttacttaaaagcaaattac
cctgttgaatatatggctgcactcctcacagccagcagtaataatacagacaagattgaa
aaatatattgatacttgtcggcggatgaatattgatgtggaaccgccagatattaatcgt
tctcaaattgattttacccccgataatgaaaagattctgtttggtttatctgcggtgaga
aatttaggacaaggggcaattgaaaatattttagcagcccgagaagaagcgggaggaacg
tttacatctttagccgatctttgtgccagaattgatttacatacggtgaaccgtcgggct
ttagaagcgttaatttattgtggagcatttgataaaattaattctaatcggaatcaattg
ttgcatgatttagaacccgttctcagttgggcgcaaagtcgagcaaaagacaaagccagt
ggacaaacgaatctttttgaagctcttaatagtagtcaagaagaggatcataatagatcc
gactataaagatgttcctacggcttctcctgtggaagattttagtgccactgacaaactg
aaacatgaaaaagatttattaggcttttatgtgtccgatcatcccttaaaaacaacgaaa
cccgcgagtgcaatgctgtcggcggtgatgctaggagatcaagaacatattcccaagaaa
aagccgattagtgccattattttactcacagaggtgaagaaaattatgacgcgcaataat
gaaccgatggcatttgtgcaaatggaagatatctctggacaaatggaaggggtgattttt
ccgagttcctatgaacggataagtccgtatttagaagaagatgcacggttaattgtttgg
ggaaaaattgacgaaaaagatgatcggttacagatgattattgatgatgccgaaccgatt
gaacaagtgaaaatggtaatggttgattttagtttcgaccaagcgcgcgatcgcgctcat
caacaaaaattacaacaaactttaaaacaatttgtcgcgaaaaagaatgaagcgaaagtt
ccagtcatcggcagaatcaaagtgggaaaccaacagcaactgattcgctttggacaacaa
tattgggtgaaagatgccaacttggcctctcaggaattaaaagcccaaggctttcaagca
gaagccaacgccctagttgcaactgcctga
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