KEGG   Haloplanus rubicundus CBA1112: DU484_11020
Entry
DU484_11020       CDS       T05557                                 
Name
(GenBank) AAA family ATPase
  KO
K10742  DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]
Organism
haq  Haloplanus rubicundus CBA1112
Pathway
haq03030  DNA replication
Brite
KEGG Orthology (KO) [BR:haq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DU484_11020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:haq03032]
    DU484_11020
Enzymes [BR:haq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     DU484_11020
DNA replication proteins [BR:haq03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    DU484_11020
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     DU484_11020
SSDB
Motif
Pfam: AAA_11 AAA_12 AAA_30 Dna2 AAA_19 PDDEXK_1 Viral_helicase1 AAA_22 UvrD_C_2 AAA_16 ResIII UvrD-helicase SLFN-g3_helicase bpMoxR AAA_25 Helicase_RecD DEAD AAA_33 nSTAND3 SRP54 AAA AAA_24 AAA_5 CbiA AAA_7 Mg_chelatase PhoH
Other DBs
NCBI-ProteinID: AXG10332
UniProt: A0A345EDR0
LinkDB
Position
complement(1973698..1976361)
AA seq 887 aa
MNFRGTILDVGEVRSVSTQYGERDLVEVTARPDDDAGVDAAETTVTLWGKWTHTADHAAP
GMDLLVTDAERTEFRGESGYATGGDSYVVLEPDFLVDVTDVRSWVQCPRMYYLNKLSGVP
LAYPVVKGTIVHEVFGDLLRGRDLDESVADHVEAAGLELGLLGREAGEVRDEVRRNAAAI
EGWLAQGTLTEEDEWRSEYTLISPTFGVKGRADALRRDSPVELKTGKNTKREPRFHDKIQ
AATYALLLGESGDPPNTGTLLYTKNAALDRSEASGDLSPAKEFSVGRGLLEFVVRTRNEI
AAMEAERDVPTGYEADAKCEWCFEQDTCMVVSGRLDQESKAGQIGTAIPEEERDYFADFY
RAIEDERSAVHDEYRKLWEQDARERADADRALIDLDPLDRRQLPDGDWELRARVPDGAVS
KLREGDVALASSGNPVHGDAELGRIRSLGDEAVVTVDEPLDLRRLDVYPSEISVSRQLTA
LHDVLLKGDPDRKDVLFGRRDPTFTGVSETFIDNNDAQNTAVQRAVGADDFALVHGPPGT
GKTYTIARLVRALVDRGDRVLLSAFTNRAVDNALDALREQGFEDVARVGTKTGVREDMLD
VRLERRGEPNDRAAALRNAPVVAATTATCGSRVLREADFDVAVVDEASQLTEPGTLAAVN
LADRFVLVGDHQQLPPVVQSGDERLATSLFERLHDDHPDAAVMLDRQYRMSQRIQAFASR
EFYDGALRPATPAVAGGSLGDLPGVDAASLPAHLRQGVRFIDPDGRQAGNANPVEADRVA
AVVEEYIDAGVDPDDVVVIAPFRAQVAEISRRVDVAVDTVDRFQGSSAEVVVVSFVATGD
LDGPIFEDTRRVNVALTRAKKALVLVGDAAALDSEPFYARMLDWARR
NT seq 2664 nt   +upstreamnt  +downstreamnt
gtgaactttcgcgggacgattctggacgttggcgaggtgcggtccgtctcgacgcagtac
ggcgagcgggacctggtcgaggtgaccgctcgcccggacgacgatgcgggggtcgacgcc
gccgagacgacggtcaccctctggggcaagtggacccacaccgccgaccacgccgccccg
gggatggacctcctcgtcaccgacgcggagcggacggagttccggggggagtcgggctac
gccacgggcggcgactcctacgtcgtcctcgaaccggacttcctcgtcgacgtgaccgac
gtgcgctcgtgggtgcagtgcccgcggatgtactacctgaacaagctctccggcgtcccc
ctcgcgtacccggtggtcaaggggactatcgtccacgaggtgttcggcgacctgttgcgg
ggtcgggacctggacgagtcggtcgcggaccacgtcgaggcggccggcctcgaactcggc
ctgctgggccgcgaggcgggggaagtgcgcgacgaggtgcggcgcaacgccgccgccatc
gaggggtggctggcacaggggacgctcaccgaggaggacgagtggcgctccgaatacacg
ctcatcagccccacgttcggggtgaaagggcgggccgacgccctgcggcgcgacagtccg
gtcgaactcaagacggggaagaacacgaagcgcgaaccccgatttcacgacaagattcag
gcggcgacgtacgcgctcttgctgggcgagtcgggcgacccgccgaacacgggcaccctc
ctctacaccaagaacgcggcgctcgaccggagcgaggcgagcggcgacctctcgccggcc
aaggagttctcggtcgggcgcgggttgctcgagttcgtcgtccgcacccgcaacgaaatc
gcggccatggaggccgagcgcgacgtaccgacgggctacgaggccgacgccaagtgcgag
tggtgtttcgaacaggacacctgcatggtcgtctccggccgactcgatcaggagtccaag
gccggacagatcggcaccgcgatccccgaggaagagcgcgactacttcgccgacttctac
cgcgccatcgaggacgaacgcagcgccgtccacgacgagtaccggaagctgtgggaacag
gatgcgagggaacgggccgacgccgaccgggcgctgatcgacctcgaccccctcgacagg
cggcagttgcccgacggcgactgggaacttcgcgcccgagtccccgacggtgcggtgtcg
aagctccgcgagggtgacgtggcactcgcgagttcgggtaaccccgtccacggcgacgcc
gaactcggccggattcggtcgctcggcgacgaggcggtcgtcacggtcgacgaacccctg
gacctccggcgactcgacgtgtatccctccgaaatatccgtctccagacagttgacggcg
ctccacgacgtcctgctgaagggcgaccccgaccgcaaggacgtgctgttcgggcggcgc
gatccgacgttcaccggcgtctcggagacgttcatcgacaacaacgacgcccagaacacg
gccgtccagcgcgccgtcggcgccgacgacttcgcgctcgtccacggcccgccggggacg
ggcaagacctacaccatcgcccgtctggtccgggcgctcgtcgaccgcggcgaccgcgtc
ctcctctcggcgttcacgaaccgcgccgtcgacaacgcgctcgacgccctccgcgaacag
gggttcgaggacgtggcccgcgtcgggacgaagacgggcgtccgcgaggacatgctcgac
gtgcgcctcgaacgccgcggggagccgaacgaccgggcggccgcgctccggaatgccccc
gtcgtcgccgccaccaccgccacctgtggctcccgcgtcctccgcgaggcggacttcgac
gtggccgtcgtcgacgaggcctcgcaactcaccgagcccggaacgctcgcggccgtcaac
ctcgcggatcggttcgttctcgtcggcgaccaccagcagctcccgccagtcgtccagtcg
ggcgacgaacggctcgccacgtcgctgttcgagcgcctccacgacgaccaccccgacgcc
gcggtcatgctcgaccgccagtaccgcatgagccagcgcatccaggccttcgcctcccga
gagttctacgacggcgcactccgccccgcgacgccggcggtggcgggcgggtcgctcggg
gacctccccggcgtcgacgcggcgtcgctgccggcacacctccgtcagggcgtccgcttt
atcgaccccgacggccggcaggcgggcaacgccaaccccgtcgaggccgaccgggtggcg
gcggtcgtcgaggagtacatcgacgccggcgtcgaccccgacgacgtggtggtgatcgcc
cccttccgcgcgcaggtggccgaaatcagtcggcgagtggacgtggccgtcgacaccgtc
gaccgcttccaggggtcgagcgccgaggttgtcgtcgtctccttcgtcgccacgggggac
ctcgacggtcccatcttcgaggacacccgtcgggtgaacgtggcgctcacgcgggcgaag
aaggccctcgtcctcgtcggcgacgcggcggcgctggactccgagccgttctacgcccgg
atgctcgactgggcgcggcgctag

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