Herminiimonas arsenicoxydans: HEAR0454
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Entry
HEAR0454 CDS
T00490
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase (KDO synthetase)
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
har
Herminiimonas arsenicoxydans
Pathway
har00540
Lipopolysaccharide biosynthesis
har01100
Metabolic pathways
har01250
Biosynthesis of nucleotide sugars
Module
har_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
har00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HEAR0454 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
har01005
]
HEAR0454 (kdsA)
Enzymes [BR:
har01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
HEAR0454 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
har01005
]
Lipid A
HEAR0454 (kdsA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
ARI1_UBAl
GFO_IDH_MocA
Motif
Other DBs
NCBI-ProteinID:
CAL60670
UniProt:
A4G2D3
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All DBs
Position
complement(454160..455002)
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AA seq
280 aa
AA seq
DB search
MIKIGDIKVDNALPFVLFGGINVLESRDLAMKSCEEYVRVTQKLGIPYVFKASFDKANRS
SIHSYRGPGLEEGMRIFEEVKKTFNVPVITDVHEVHQAEIVAEVADVLQLPAFLARQTDL
VVALAKTGSVINIKKPQFLSPSQMMNIVEKFKEAGNEQLILCDRGTCFGYDNLVVDMLGF
GVMKKVCNNLPIIFDVTHALQQRDPGGAASGGRREQVADLARAGMSVGLAGLFLEAHPDP
KSAKCDGPSALPLDKLEPFLAQLKQLDDLVKSFAPLDIEA
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaatcggtgacatcaaggtcgataatgcactgcccttcgtcctgttcggcggc
atcaacgtgctcgaatcacgcgaccttgcgatgaagtcttgcgaagaatacgtacgcgtt
acgcaaaaactcggtatcccttacgtgttcaaggcatcgttcgacaaagccaatcgctca
tcgatccactcctatcgcggccctggcctggaagaaggcatgcgcatttttgaagaagtc
aaaaagaccttcaacgtgcctgtcatcaccgatgtacatgaagtgcatcaagctgagatc
gtggcagaagtggctgacgtgctgcaattgccagcctttctcgcgcgccagacagacctg
gtcgttgcactggcaaaaaccggcagcgtcatcaatatcaagaagccgcagttcttgagt
ccgtcgcaaatgatgaatatcgttgaaaaattcaaggaagccggcaacgaacaattgatt
ctatgcgaccgcggtacctgcttcggctacgacaatctggtcgtggacatgctgggtttc
ggcgtgatgaaaaaagtgtgcaataacctgccgattatttttgacgtgacgcatgcattg
cagcagcgcgatccgggcggcgccgcctccggcggtcgccgcgaacaggtagccgatctg
gcgcgtgcgggcatgagcgtgggtctcgccggcttgttcctggaagcacatccggatccg
aagtctgcgaaatgcgatggacctagtgctttaccattggataaacttgagccgtttttg
gcgcagttgaagcagctggatgacttggtgaaatcctttgcgccattggatattgaagcg
tag
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