Hafnia alvei: AT03_01835
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Entry
AT03_01835 CDS
T03425
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hav
Hafnia alvei
Pathway
hav03420
Nucleotide excision repair
hav03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AT03_01835 (uvrD)
03430 Mismatch repair
AT03_01835 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hav03400
]
AT03_01835 (uvrD)
Enzymes [BR:
hav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AT03_01835 (uvrD)
DNA repair and recombination proteins [BR:
hav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AT03_01835 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AT03_01835 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_22
PhoH
Motif
Other DBs
NCBI-ProteinID:
AIU71254
UniProt:
A0A097QXQ0
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All DBs
Position
378555..380717
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AA seq
720 aa
AA seq
DB search
MDVSDLLNSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLSVENCSPFSIMAV
TFTNKAAAEMRHRIEHLIGTSQGGMWIGTFHGLAHRLLRAHHLDANLPQDFQILDSDDQL
RLLKRIVKALNLDEKQWPPRQGMWYINNKKDDGLRPQHIESYGNPVEQTWLRVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPQILNHYRERFTNILVDEFQDTNRIQYAWIQMLAGNS
GKVMIVGDDDQSIYGWRGAQVENIQRFLDDFPGAETIRLEQNYRSTSNILKAANALIENN
DGRLGKKLWTEDGDGEKISLYCAFNELDESRFVVNRIKAWQDNGGSLNDCAILYRSNAQS
RVLEEALLQVAMPYRIYGGQRFFERQEIKDALAYLRLISNRNDDAAYERVVNTPTRGIGD
RTLDVIRQAARDRQLTLWQATHELIQEKVFAGRASGALQRFIELIDALASDTADMPLHVQ
TDRVVRDSGLRQMYEQEKGEKGQTRIENLEELVTATRQYSYEDEDEDLLPLQAFLSHAAL
EAGEGQADAYQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMRKLTITYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRASVTRPVKHASMG
TPISANDSGFKLGQRVKHATFGEGTVINLEGSGEHSRLQIAFQGEGIKWLVAAYAKLEAM
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttccgatctgctcaacagccttaacgataaacaacgcgaagccgttgctgca
ccacgcagcaatcttctggtgctggctggagccggaagcggcaagacgcgcgtcttagtg
catcgcatcgcatggctgctgtcggtagaaaactgttcgccgttctcgattatggccgtc
acctttaccaacaaagccgccgcggagatgcgccaccgtatcgaacatctgattggcact
agccaaggcggcatgtggatcggtactttccacggcttggcgcatcgcctgctgcgtgcc
catcatctggatgccaatctgccgcaggatttccaaattcttgatagcgatgaccagctg
cgtttgcttaaacgtatcgttaaggccttgaatctagatgagaagcagtggccgccgcgt
caaggcatgtggtacatcaacaacaaaaaagatgatggtctgcgccctcagcacattgaa
agctacggaaatccggtagaacagacatggctgcgcgtctatcaggcctatcaagaagcc
tgcgatcgtgcggggctggtggatttcgccgagctgctattacgcgctcacgagctttgg
ctcaacaagcctcaaatcctcaatcactatcgcgaacgtttcaccaatattctggtggac
gaattccaagataccaaccggattcagtacgcatggatccagatgctggcaggcaatagc
ggcaaagtgatgattgttggcgatgacgatcagtcgatctatggctggcgtggcgctcag
gttgagaacatccaacgttttctggatgatttccccggtgctgagactatccgcttagaa
caaaactaccgctcaaccagcaatatattgaaagccgcgaacgccttaattgaaaacaac
gatgggcgcttgggtaaaaaactgtggaccgaagacggtgacggcgaaaaaatttcgctc
tactgcgcgtttaatgaattggatgaatcacgttttgtggtgaatcgtattaaagcgtgg
caggacaacggcggctctcttaacgactgcgccattctttatcgtagcaacgcccaatcg
cgtgtattggaagaggcgctgttacaggtggcgatgccataccgtatttacggtggacaa
cgattcttcgaacgtcaggaaatcaaagatgcgttggcgtatttacgcctgatatccaac
cgtaatgacgatgcggcgtatgagcgtgtggttaacacgccaacgcgcggtattggcgat
cgtacgctggacgttatccgccaagccgcccgcgatcgtcaactgacgttatggcaggcc
acacacgagctgatccaagaaaaagtgtttgctgggcgagcctcaggcgcactacagcgc
tttatcgagctgattgatgccttagccagtgatacggctgatatgccgctgcatgtacag
acagaccgcgtggtgcgcgattcgggtctgcgtcagatgtatgagcaagaaaagggtgaa
aaaggccaaacgcgtattgagaacttagaagaactggtgaccgctacgcgccagtacagc
tatgaggatgaagacgaggacttgctaccgttgcaggcattcctttcacatgcggcgctt
gaagccggtgaagggcaagcagacgcttatcaagacgcggttcagctcatgacgttgcac
tcggcgaaaggtctggaattcccacaggtgtttatcgtggggatggaagaggggatgttc
ccaagccaaatgtcgctggacgaaggcgggcgtttggaagaagaacgccgcttggcctac
gttggggtgacgcgagcgatgcgaaaactgacgattacctatgcggaaactcgccgtttg
tatggcaaagaggtttatcaccgcccatctcgctttattggtgaattgccagaagagtgt
gtagaagaggtgcgcctgcgggcaagcgttacccgtcccgttaaacacgccagcatggga
accccaatcagcgccaatgacagcggtttcaaactcggtcagcgggtcaaacacgctacg
tttggtgaaggtacggtgatcaatctggaaggcagcggtgagcatagtcgcttgcagatt
gcgtttcagggcgaaggcattaagtggctggttgcggcctatgccaagttagaggcgatg
taa
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