KEGG   Hafnia alvei: AT03_01835
Entry
AT03_01835        CDS       T03425                                 
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
hav  Hafnia alvei
Pathway
hav03420  Nucleotide excision repair
hav03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hav00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AT03_01835 (uvrD)
   03430 Mismatch repair
    AT03_01835 (uvrD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hav03400]
    AT03_01835 (uvrD)
Enzymes [BR:hav01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AT03_01835 (uvrD)
DNA repair and recombination proteins [BR:hav03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AT03_01835 (uvrD)
   MMR (mismatch excision repair)
    Other MMR factors
     AT03_01835 (uvrD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor UvrD_C_2 AAA_30 Viral_helicase1 AAA_11 AAA_22 PhoH
Other DBs
NCBI-ProteinID: AIU71254
UniProt: A0A097QXQ0
LinkDB
Position
378555..380717
AA seq 720 aa
MDVSDLLNSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLSVENCSPFSIMAV
TFTNKAAAEMRHRIEHLIGTSQGGMWIGTFHGLAHRLLRAHHLDANLPQDFQILDSDDQL
RLLKRIVKALNLDEKQWPPRQGMWYINNKKDDGLRPQHIESYGNPVEQTWLRVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPQILNHYRERFTNILVDEFQDTNRIQYAWIQMLAGNS
GKVMIVGDDDQSIYGWRGAQVENIQRFLDDFPGAETIRLEQNYRSTSNILKAANALIENN
DGRLGKKLWTEDGDGEKISLYCAFNELDESRFVVNRIKAWQDNGGSLNDCAILYRSNAQS
RVLEEALLQVAMPYRIYGGQRFFERQEIKDALAYLRLISNRNDDAAYERVVNTPTRGIGD
RTLDVIRQAARDRQLTLWQATHELIQEKVFAGRASGALQRFIELIDALASDTADMPLHVQ
TDRVVRDSGLRQMYEQEKGEKGQTRIENLEELVTATRQYSYEDEDEDLLPLQAFLSHAAL
EAGEGQADAYQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMRKLTITYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRASVTRPVKHASMG
TPISANDSGFKLGQRVKHATFGEGTVINLEGSGEHSRLQIAFQGEGIKWLVAAYAKLEAM
NT seq 2163 nt   +upstreamnt  +downstreamnt
atggacgtttccgatctgctcaacagccttaacgataaacaacgcgaagccgttgctgca
ccacgcagcaatcttctggtgctggctggagccggaagcggcaagacgcgcgtcttagtg
catcgcatcgcatggctgctgtcggtagaaaactgttcgccgttctcgattatggccgtc
acctttaccaacaaagccgccgcggagatgcgccaccgtatcgaacatctgattggcact
agccaaggcggcatgtggatcggtactttccacggcttggcgcatcgcctgctgcgtgcc
catcatctggatgccaatctgccgcaggatttccaaattcttgatagcgatgaccagctg
cgtttgcttaaacgtatcgttaaggccttgaatctagatgagaagcagtggccgccgcgt
caaggcatgtggtacatcaacaacaaaaaagatgatggtctgcgccctcagcacattgaa
agctacggaaatccggtagaacagacatggctgcgcgtctatcaggcctatcaagaagcc
tgcgatcgtgcggggctggtggatttcgccgagctgctattacgcgctcacgagctttgg
ctcaacaagcctcaaatcctcaatcactatcgcgaacgtttcaccaatattctggtggac
gaattccaagataccaaccggattcagtacgcatggatccagatgctggcaggcaatagc
ggcaaagtgatgattgttggcgatgacgatcagtcgatctatggctggcgtggcgctcag
gttgagaacatccaacgttttctggatgatttccccggtgctgagactatccgcttagaa
caaaactaccgctcaaccagcaatatattgaaagccgcgaacgccttaattgaaaacaac
gatgggcgcttgggtaaaaaactgtggaccgaagacggtgacggcgaaaaaatttcgctc
tactgcgcgtttaatgaattggatgaatcacgttttgtggtgaatcgtattaaagcgtgg
caggacaacggcggctctcttaacgactgcgccattctttatcgtagcaacgcccaatcg
cgtgtattggaagaggcgctgttacaggtggcgatgccataccgtatttacggtggacaa
cgattcttcgaacgtcaggaaatcaaagatgcgttggcgtatttacgcctgatatccaac
cgtaatgacgatgcggcgtatgagcgtgtggttaacacgccaacgcgcggtattggcgat
cgtacgctggacgttatccgccaagccgcccgcgatcgtcaactgacgttatggcaggcc
acacacgagctgatccaagaaaaagtgtttgctgggcgagcctcaggcgcactacagcgc
tttatcgagctgattgatgccttagccagtgatacggctgatatgccgctgcatgtacag
acagaccgcgtggtgcgcgattcgggtctgcgtcagatgtatgagcaagaaaagggtgaa
aaaggccaaacgcgtattgagaacttagaagaactggtgaccgctacgcgccagtacagc
tatgaggatgaagacgaggacttgctaccgttgcaggcattcctttcacatgcggcgctt
gaagccggtgaagggcaagcagacgcttatcaagacgcggttcagctcatgacgttgcac
tcggcgaaaggtctggaattcccacaggtgtttatcgtggggatggaagaggggatgttc
ccaagccaaatgtcgctggacgaaggcgggcgtttggaagaagaacgccgcttggcctac
gttggggtgacgcgagcgatgcgaaaactgacgattacctatgcggaaactcgccgtttg
tatggcaaagaggtttatcaccgcccatctcgctttattggtgaattgccagaagagtgt
gtagaagaggtgcgcctgcgggcaagcgttacccgtcccgttaaacacgccagcatggga
accccaatcagcgccaatgacagcggtttcaaactcggtcagcgggtcaaacacgctacg
tttggtgaaggtacggtgatcaatctggaaggcagcggtgagcatagtcgcttgcagatt
gcgtttcagggcgaaggcattaagtggctggttgcggcctatgccaagttagaggcgatg
taa

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