Halomonas axialensis: HAALTHF_03810n
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Entry
HAALTHF_03810n CDS
T06639
Name
(GenBank) hypothetical protein
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
haxi
Halomonas axialensis
Pathway
haxi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
haxi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HAALTHF_03810n
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haxi03019
]
HAALTHF_03810n
Enzymes [BR:
haxi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
HAALTHF_03810n
Messenger RNA biogenesis [BR:
haxi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HAALTHF_03810n
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
HPPK
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
BBI70384
LinkDB
All DBs
Position
244834..246663
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AA seq
609 aa
AA seq
DB search
MFKGFTRLLHSPGEHLKSLLDSPESASDALSPRIIPRSEHPVSRQQISEAALKVLYRLNG
AGFDAYLVGGCIRDALLGKMPKDFDVATNATPEQVRDLFRNSRLIGRRFRIVHVRFGREV
IEVTTFRGKPQDEHGDHIAHQSDDGLLLRDNVWGNIEEDALRRDFTVNALYYNIADFTIH
DFANGVRDIESRTLRLIGDPATRYREDPVRMLRAVRFAAKLGFTIEPATEAPMYDLAPLL
LQIPPARLFDEVLKLFMAGHGLITFRLLSHYNLFGMLFPESEEAMADAAWAEELIEQALA
NTDKRIAEDRPVTPAFLLAAFLWAPVVHRQAELEREGMPAVPALQTAAQQVVSRQLQHTS
IPKRFGIPMREIWELQARLPMRRGKRAFQTREHPRFRAAYDLLLLREQAGEIPRGLGDWW
TAFQKGDEHEQLRLLQKVGSDPASQGDRRRKNAASRGRRTVNNAIRSYIGLGSNLENPKG
QVQQALQELAALPLSRLVASSSLYATPPVGPQDQPDFINAVACLETHLSPLALLDQLQAL
EQRHRRRRLRHWGPRTLDLDLLLYGELTLHQPRLTVPHGQMHARAFVLVPLVEVATALQH
PITPTSAAA
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaggatttacccgtttattacatagcccgggagagcacttgaaatccctgctc
gattccccagagagcgcctctgatgcgctcagccctcgtattattccgcgctccgagcat
cccgtctctcgtcagcaaatcagtgaagccgcgctcaaggtgctgtaccgcctcaatggg
gctggtttcgatgcctatcttgtcggtggctgcattcgcgacgcgctgctgggcaaaatg
ccgaaagacttcgatgttgccaccaacgcaacgcccgagcaggtgcgcgacctatttcgc
aactcacgcctgattggccgccgcttccgcatcgttcacgtgcgctttggccgcgaagtc
atcgaggtgaccaccttccgtggtaaaccccaggacgagcacggcgaccatatcgctcac
cagtcggacgatggcctgctgctgcgggacaacgtgtggggcaatatcgaagaggacgcg
ctgcgccgtgacttcaccgtcaatgcgctctactacaatattgctgatttcacgatccac
gactttgccaacggcgtgcgggatattgagtcgcgcacgctgcggctgatcggcgacccc
gccacccgctaccgtgaagacccggtacggatgctgcgcgcggttcgctttgcagccaag
ctcggcttcacgatcgagcccgccaccgaagcgccgatgtacgacttggcgccactgctg
ctgcaaattccgcctgcgcgcctgtttgatgaagtgctcaagctgtttatggcgggccac
ggattaatcactttccgcctgctcagccattacaatctgtttggcatgctcttcccggaa
tcagaagaagccatggccgatgccgcttgggcagaagagctcattgagcaggcactcgcc
aataccgataagcgtatcgccgaagaccggcccgtcacgcccgcgtttttgctggcagca
tttctgtgggcgccggtcgttcaccgccaggccgagctcgagcgcgagggcatgcctgcc
gtgcccgccctgcaaaccgcagctcagcaggtcgtatcgcgccagcttcagcacacctcc
attcccaagcgttttgggattcccatgcgcgaaatttgggagctgcaagcacgcttgccg
atgcgccggggcaaacgggctttccaaacccgcgagcatccgcgcttccgtgctgcttat
gacctcctgttgctacgtgagcaggcgggtgaaattccccgtgggctgggcgactggtgg
acggcatttcagaaaggcgatgagcacgaacagctccgcctactgcaaaaagtcggcagc
gatcctgccagccaaggtgaccgccggcgcaaaaacgccgcaagccgcggaaggcgaaca
gtgaataacgccattcgtagttacatcggccttggtagcaatttggagaaccccaaaggt
caggtgcagcaggcgcttcaagagctagctgccctgcccttgtctcggctggtggctagc
tcgtcactctacgccaccccccctgtaggccctcaagaccagcctgactttatcaacgcg
gtcgcctgcctcgagacgcatctttcgcctttggcactgttggatcaactgcaggcgctg
gagcagcgccatcgccggcggcggctgcgccactgggggccgcgcacgctggatttagac
ctgctgctctacggcgaactcacgcttcatcagccacgcttgaccgttccccatgggcag
atgcacgcccgcgctttcgtgttagtcccactggtggaagtggccacagcgcttcagcac
cccatcacccctacatcagcagccgcttaa
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