Hyphomonadaceae bacterium UKL13-1: AEM38_06085
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Entry
AEM38_06085 CDS
T04338
Name
(GenBank) hypothetical protein
KO
K03579
ATP-dependent helicase HrpB [EC:
5.6.2.6
]
Organism
hbc
Hyphomonadaceae bacterium UKL13-1
Brite
KEGG Orthology (KO) [BR:
hbc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
AEM38_06085
Enzymes [BR:
hbc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AEM38_06085
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
ResIII
Flavi_DEAD
AAA_30
AAA_19
nSTAND3
PRAI
Motif
Other DBs
NCBI-ProteinID:
AMS29122
UniProt:
A0A7U4XX88
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All DBs
Position
1309183..1311648
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AA seq
821 aa
AA seq
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MLAAIPPDLPIVAVLDRLVEVLQTQNSAVLVAPPGAGKTTSVPLALLDQSWAAGKKILML
APRRLAARAAAARMADLLREAVGETVGYQVRLDKKISGRTRIEVITEGILTRRMLTDPEL
SDVAAVIFDEVHERNLEGDLGLALALDIQAGLREDLRLIAMSATVEGGQLAAQLGGAELI
ESAGRLYPIETFYVGRTQDQPIEGQAANIALKALSKGPGDVLVFLPGTAEINRAYEAIHA
KAATMSCAVIPLHGSLSPAEQDQALRPQAGVQRKIILSTAIAETSLTIEGVQIVVDAGLS
RRPAFEPDSGLTRLVTVRASRAACDQRRGRAGRTAPGQCYRLWEEAEMGAFPAYDRPEIL
EADLAPLVLTLSSFGVSDPTSLKWLDPPPAPALWEATKLLIDLEALEAPAGQAPRLTPHG
KKLVSFGLPPRLAHMIVRAGELGFGATAAHLAALLSERGLGGTSPDLEHRLISFARDRSP
RANKARAQAHGWAKQVGATEAPVAELAGRALALAFPERVAKARDRRGGFILVNGSGGELP
THEGLATAEFLAIGALQGKAADARINEAARLDKADLEALFANQIETRTQTQFDRAKGTMQ
GRHQRRLGALILEERPVSLTADQIEAGLFDAVRSLGLDKLNWSDRAKSFVERLKWLYARD
PDQWPQGKPGALEEALQVWLLPALVGVKNLSDVDVAQALENFLTWPERQAMAQAAPTHFV
TPLETRHTIDYAAEQGPTIEVRVQELFGLERHPMLAGGQVALVFQLLSPAHRPIAVTSNL
PEFWKAGWHDVRKDMKARYPRHVWPEDPATAQPTARAKPRT
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgttggcggccattccgccagatttgccaattgtcgccgtgctggaccgcttggtagag
gtcctgcagacccaaaattctgccgtgcttgtcgccccacccggggcaggcaagacgact
tcggtgcctttagctttgctggatcagtcgtgggcggcgggtaaaaaaatcctgatgctg
gcaccaaggcgtttggccgctcgggccgcagccgcccgtatggctgacttgctgcgcgaa
gccgtgggcgagacggtcggctatcaagtgcggcttgataagaagatcagtgggcgcacc
cgcatcgaagtcatcaccgaaggcattctcacacggcgcatgctgacggaccccgaactc
agcgatgttgccgccgtcattttcgatgaagtccacgagcgcaatctggagggcgactta
ggtctggctttggcgctcgatattcaagcgggcctgcgagaggatttgcgcctgatcgcc
atgtccgcaaccgtcgaaggcggacaattggcggctcaattgggcggcgcagagctcatc
gagagcgctggccgactctacccgattgagactttctatgtcggtcgcacgcaagatcag
ccgatagaaggtcaagctgccaacattgccttgaaggccttatcgaaagggccgggcgat
gtgttggtgttcttgcccggcacggccgagatcaaccgcgcttatgaagccattcatgcc
aaagccgccaccatgtcctgtgcggttatccccttgcatgggtctttgagccccgcggag
caggatcaagcgcttcgccctcaagccggcgtgcaacgcaaaatcatcctttcaaccgcg
attgccgagaccagtctgaccattgaaggcgtgcagatcgtggtcgacgcgggtctatcg
cgcaggccggcctttgagcccgatagcggcctgacccgcttggtgacggtgcgcgctagc
cgggcagcgtgtgatcaacgtcgagggcgggcgggtcgaaccgcacctgggcaatgctat
cgtctgtgggaagaggccgaaatgggcgcgtttccagcctatgatcgccctgaaattctc
gaagcagaccttgcacccttggtgctgactttgtcgtcttttggcgtgtcggaccccacc
agtttaaagtggctggacccgcccccggcaccagctctgtgggaagcaaccaagcttctg
atcgatctggaggccttggaagcaccagccggtcaagccccccgtctgaccccacatggc
aagaaactggtcagctttggcctgccaccgcgcttggcccatatgatcgtgcgggcagga
gagctgggctttggcgcaacggcagcgcatctggcagctttgttgagcgagcgtggattg
ggtggcacctcgcctgatctggaacaccgtctgatctcatttgcccgtgaccgttcgcct
cgggccaacaaggcgcgcgcccaagcccatggttgggcaaagcaagttggcgcaacagag
gcccctgttgcagaattggcagggcgggcgctggcgcttgccttccccgagcgtgtcgcc
aaagcgcgcgaccgccgcggcggcttcattttggtcaatggcagtggcggcgaattgcct
acccatgaagggctggcgactgccgaatttctggccattggtgccctgcagggcaaagcc
gccgatgcgcggattaatgaggcggcgcgcctcgataaggccgatttggaagcgctgttc
gcaaaccagattgaaacccgtacccagacccaatttgatcgggcgaaagggaccatgcag
ggccgccatcaacgccgcctcggcgcgctaatcttggaagagcgcccggtttccttgacc
gccgatcagattgaagcgggcctgtttgatgcggtccgcagccttggcctcgacaagctc
aactggtcggatcgggccaagtcctttgtcgagcgcttgaaatggctttacgcccgcgat
cccgaccagtggccgcagggaaagcctggggctttagaagaggctttgcaagtctggttg
ctgcctgccttggtgggggtaaagaacctatccgatgtggatgtggcccaagcgctggag
aacttcctcacttggccagaacgccaagccatggcgcaagccgccccgacccattttgtc
acgcccctcgaaacgcgccacacgattgattatgcggcagagcaaggtccgacaattgag
gttcgtgttcaggaattattcggcctagagcgtcatcccatgttagcaggcgggcaggtg
gctttggtgttccaattgctctcccctgcccatcgccccatcgcagtcacttctaatttg
ccggaattctggaaggctggttggcacgatgtccgcaaggacatgaaagcgcgttacccg
cgtcatgtctggcccgaagatcccgcaactgcgcaaccgacggcacgggctaaaccgcgc
acttga
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