Hyphomonadaceae bacterium UKL13-1: AEM38_07560
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Entry
AEM38_07560 CDS
T04338
Name
(GenBank) hypothetical protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hbc
Hyphomonadaceae bacterium UKL13-1
Pathway
hbc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AEM38_07560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbc03400
]
AEM38_07560
Enzymes [BR:
hbc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AEM38_07560
DNA repair and recombination proteins [BR:
hbc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AEM38_07560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AMS29345
UniProt:
A0A7U4QTE4
LinkDB
All DBs
Position
1629451..1630077
Genome browser
AA seq
208 aa
AA seq
DB search
MQQPTRDCPLCPRLVAYRATNRLENPDWYNGPAPSFGDDDAWLLIVGLAPGRTGANRTGR
PFTGDWAGDLLYQTLARFDLSDGTYAAHVGDGLSLKGVMITNAVQCAPPANKPEPSEIAQ
CAPFLKAQIAALPSLTSLICLGKISHDATVRALGAKPSAYKFAHGAVHQIGDKTLYDSYH
CSRYNTNTGRLTTQMFEDVFAKACLDAG
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
gtgcaacaacccacacgcgattgcccgctgtgcccccgattggttgcttaccgtgcaacc
aatcggctagaaaatccagactggtataatggccctgccccctcgtttggggatgacgac
gcttggctgttgatcgtgggcctcgcccctggccggaccggagccaatcgtacgggtcgg
ccctttaccggcgattgggcgggcgacctgctctatcagaccttagctcgctttgacttg
tcggacggcacctatgcggcgcacgtgggcgatggtctgtcgctaaaaggcgtgatgatc
accaatgctgtgcagtgcgcgccgccagccaacaagcctgaaccgtccgaaatcgcccaa
tgcgcaccgtttttgaaggcgcagattgcagcactgccaagcctcacaagcctcatctgc
cttggcaagattagccatgatgcaaccgttcgcgcgctcggagccaagccctctgcctat
aagttcgctcatggcgcggtccaccagattggcgacaagaccctttatgacagctatcat
tgcagccgctacaacaccaatacggggcggttgaccacgcagatgtttgaggatgtgttt
gctaaggcctgcctcgacgccggctag
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