Halomonas beimenensis: BEI_3239
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Entry
BEI_3239 CDS
T05125
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
hbe
Halomonas beimenensis
Pathway
hbe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BEI_3239 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbe03400
]
BEI_3239 (mutM)
Enzymes [BR:
hbe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BEI_3239 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BEI_3239 (mutM)
DNA repair and recombination proteins [BR:
hbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BEI_3239 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF5830
Motif
Other DBs
NCBI-ProteinID:
ATJ84226
UniProt:
A0A291PBE5
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All DBs
Position
complement(3442536..3443357)
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AA seq
273 aa
AA seq
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MPELPEVETTRRGIAPHVEGREITEVIVRQSRLRLPVPDDLIDRLVGARIGTLSRRAKYL
LMPFEGEPASLLWHLGMSGSLRIVRLGELPRKHDHLDLVMADGAVLRYHDPRRFGFVDWL
AGDATQDSRLARLGPEPLSEGFDGERLYAMSRGRRLAVKPFLMDNAVVVGVGNIYAAEAL
FLAGIDPRRAAGRISRERYTRLAAAVREVLAAAITQGGTTLRDFVGGTGEPGYFAQRLNV
YGRDGEPCRRCGADLRLVILGQRASVFCGQCQT
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgccagaactgcccgaagtcgagaccacccgacgtggcatcgcccctcacgtggaggga
cgcgagatcaccgaggtgatcgtgcgccagtcccgcctgcgcctgccggtccccgatgac
ctgatcgatcggctggtgggcgcccgcatcggcacgctctcgcggcgggccaagtacctg
ttgatgcccttcgagggtgagcccgccagcctgctgtggcacctcggcatgtccggaagt
ctgcgcatcgtccggctcggcgagctgcccaggaaacacgaccatctggacctggtgatg
gcggacggagccgtgctgcgctatcacgatccccgtcgcttcggcttcgtcgactggctg
gccggcgatgcgacgcaggattcgcgcctcgccaggctgggcccggagccgctctccgaa
ggcttcgacggggagcggctgtatgcgatgtcccggggccgccgcctggccgtcaagcca
ttcctgatggacaatgccgtggtggtgggcgtcggcaacatctatgccgccgaggccctg
ttcctggccgggatcgatccccgccgggccgccggacggatctcccgggaacgctacacc
cggctggcggccgcggtccgcgaggtgctggccgccgccatcactcagggcggcaccacc
ctgcgcgacttcgtcggggggaccggcgaacccggctacttcgcccagcgcctcaacgtc
tacgggcgcgacggcgagccctgccgacgctgcggcgccgacctgcgcctggtgatcctg
gggcagcgggccagcgtcttctgcggccagtgccagacctga
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