Helicobacter bilis: XJ32_09780
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Entry
XJ32_09780 CDS
T04788
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
hbl
Helicobacter bilis
Pathway
hbl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hbl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
XJ32_09780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbl03400
]
XJ32_09780
Enzymes [BR:
hbl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
XJ32_09780
DNA repair and recombination proteins [BR:
hbl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
XJ32_09780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DDE_Tnp_1_3
DUF4493
Motif
Other DBs
NCBI-ProteinID:
AQQ60331
UniProt:
A0A1Q2LIV4
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All DBs
Position
complement(2172643..2174088)
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AA seq
481 aa
AA seq
DB search
MQAQPHIPLVLQVSQLTMQIKSLLESDFSYVEVEGEVSGFTHHNSGHIYFNLKDENATIA
CTFFRHNARNNPIKLQNGDKIIAKGNISVFPPRGTYNLNIVKCVHSGIGDLKAQYEALKK
RLEERNYFCKNKPLPRFPKRIILLTSQTSAALQDMIKVASKRYCLCEFILIDTLTQGREA
KHSIAKNLAYADRLGADILVLARGGGSIEDLWSFNEMEVLEAIFACKTPVVSAIGHEIDY
LLSDYVADVRAPTPSAAMEMILCDKDNLITQLCDMESMLTHTMQTHITQKKSILNHLAQS
LEILNPLQKIAQYKLLLQTLTQNLQDSIKWFYTQKKHALLQQQERLDLAKPTQKLLIMKT
EIQSLSKKLHGEFSYIIEQKINQTKQIELELKNTMLQMMTRKRAMLNFNLHDSMQNALRQ
KRLMLNNLIDMLHALDPSKKAQYGFAQILKDNKLIQVSELQENDVIEIIDSSGIRNARIL
G
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcacaaccacacattcccttagttttacaagtcagtcagctaactatgcaaata
aagtcattgcttgagagcgattttagctatgttgaggtggaaggtgaggtaagtggcttt
acgcaccataatagcggacatatctattttaatctaaaagatgaaaatgcgacaattgct
tgcacctttttccgccataatgcacgaaataatcccattaaattgcaaaatggcgataaa
attatcgctaaaggcaacattagcgtattcccaccgcgtgggacttataatctcaacatt
gtaaaatgtgtgcatagtggtataggcgatttaaaagcacaatatgaagccctaaaaaag
agattagaagagcgaaattatttttgtaaaaacaaaccattaccacgatttcccaaaaga
ataatcctgcttacaagtcaaacaagtgccgccctgcaagatatgataaaagtagcaagc
aagcgttattgtctatgtgaatttatccttattgatacattgacacaagggcgtgaggca
aagcactctatcgctaaaaatcttgcctatgcggataggcttggtgcggatattttagtg
cttgcaaggggtggtggaagtattgaagatttatggagctttaatgaaatggaggtgcta
gaggcaatctttgcatgtaaaacacctgtggtatctgcaattgggcatgagatagactat
cttttaagcgattatgttgctgatgtgagagccccgacaccaagtgctgctatggagatg
attctatgcgataaggataatctcatcacgcagttatgcgatatggaatctatgctaaca
catacaatgcaaacacatattacgcaaaaaaaatcgatattaaatcatctagcacaaagc
cttgagattctaaatccattacaaaagatagcacaatataaactgctactgcaaacactc
acacaaaacctgcaagattctataaaatggttctacacacaaaaaaaacatgccctattg
cagcaacaagagcgactagaccttgcaaaacccacacaaaaactactcataatgaaaaca
gagatacaatctctaagcaaaaagcttcatggcgagttttcatatattatcgagcaaaaa
ataaatcaaacaaagcaaatagagcttgagttaaaaaacaccatgcttcaaatgatgaca
agaaaaagggcaatgctaaactttaaccttcatgattctatgcagaatgccctgcgacaa
aaaagacttatgctaaataatctaattgatatgttacacgccctagaccctagcaaaaaa
gcacaatatggatttgcacaaattttaaaggataataaattgatacaggtaagtgagctg
caagaaaatgatgttattgaaatcatagattctagtgggataagaaacgcacgcattttg
ggctag
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